ClinVar 임상 비교
AlphaMissense AI 예측 vs ClinVar 실제 임상 분류 — 일치/불일치 분석
ClinVar 변이 (서브셋)
319,822
우리 보유 유전자만
커버 유전자
308
병원성/가능 변이
56,770
AM과 교차 가능
154,518
단백질 변이 추출
BMP4: AM vs ClinVar 일치도
186 변이✓ 둘 다 병원성
3
✓ 둘 다 양성
8
⚠ CV=병원성 / AM=양성
1
⚠ CV=양성 / AM=병원성
0
— AM 미적재
174
AM ↔ ClinVar 비교 가능 변이 12건 중 11건 일치 / 1건 불일치 — 일치도 91.7%
변이별 비교
Max 500| 변이 | ClinVar 분류 | AM 점수 | AM 분류 | 일치 | |
|---|---|---|---|---|---|
| A346V | Uncertain significance | 0.812 | pathogenic | 해석 → | |
| C373Y | Likely pathogenic | 1.000 | pathogenic | ✓ | 해석 → |
| E151V | Pathogenic | 0.983 | pathogenic | ✓ | 해석 → |
| E93* | Pathogenic | — | 미적재 | 해석 → | |
| E93G | Likely benign | 0.136 | benign | ✓ | 해석 → |
| H121R | Conflicting classifications of pathogeni | 0.746 | pathogenic | 해석 → | |
| I178R | Likely pathogenic | 0.995 | pathogenic | ✓ | 해석 → |
| R113G | Pathogenic | 0.206 | benign | ⚠ | 해석 → |
| R198* | Pathogenic | — | 미적재 | 해석 → | |
| R226W | Conflicting classifications of pathogeni | 0.144 | benign | 해석 → | |
| R256* | Conflicting classifications of pathogeni | — | 미적재 | 해석 → | |
| R286* | Conflicting classifications of pathogeni | — | 미적재 | 해석 → | |
| R287H | Benign/Likely benign | 0.137 | benign | ✓ | 해석 → |
| R310C | Uncertain significance | 0.987 | pathogenic | 해석 → | |
| S91C | Conflicting classifications of pathogeni | 0.280 | benign | 해석 → | |
| T197I | Uncertain significance | 0.578 | pathogenic | 해석 → | |
| W171* | Conflicting classifications of pathogeni | — | 미적재 | 해석 → | |
| W212* | Likely pathogenic | — | 미적재 | 해석 → | |
| A21T | Uncertain significance | 0.063 | benign | 해석 → | |
| A220V | Uncertain significance | 0.601 | pathogenic | 해석 → | |
| A235P | Uncertain significance | 0.982 | pathogenic | 해석 → | |
| A301T | Uncertain significance | 0.065 | benign | 해석 → | |
| A334D | Uncertain significance | 0.999 | pathogenic | 해석 → | |
| A334T | Uncertain significance | 0.996 | pathogenic | 해석 → | |
| A42P | Conflicting classifications of pathogeni | 0.089 | benign | 해석 → | |
| A59E | Uncertain significance | 0.200 | benign | 해석 → | |
| C14Y | Uncertain significance | 0.537 | ambiguous | 해석 → | |
| C337Y | Uncertain significance | 1.000 | pathogenic | 해석 → | |
| D166N | Uncertain significance | 0.077 | benign | 해석 → | |
| D166Y | Uncertain significance | 0.122 | benign | 해석 → | |
| D56E | Uncertain significance | 0.178 | benign | 해석 → | |
| D56V | Uncertain significance | 0.493 | ambiguous | 해석 → | |
| E123G | Uncertain significance | 0.616 | pathogenic | 해석 → | |
| E151K | Uncertain significance | 0.984 | pathogenic | 해석 → | |
| E237K | Uncertain significance | 0.519 | ambiguous | 해석 → | |
| E37D | Uncertain significance | 0.075 | benign | 해석 → | |
| E94K | Uncertain significance | 0.118 | benign | 해석 → | |
| F142L | Uncertain significance | 0.997 | pathogenic | 해석 → | |
| F161L | Uncertain significance | 0.929 | pathogenic | 해석 → | |
| F215L | Uncertain significance | 0.989 | pathogenic | 해석 → | |
| F343S | Uncertain significance | 0.998 | pathogenic | 해석 → | |
| F57L | Uncertain significance | 0.991 | pathogenic | 해석 → | |
| F57L | Uncertain significance | 0.991 | pathogenic | 해석 → | |
| G103S | Uncertain significance | 0.066 | benign | 해석 → | |
| G168R | Conflicting classifications of pathogeni | 0.175 | benign | 해석 → | |
| G174D | Uncertain significance | 0.470 | ambiguous | 해석 → | |
| G174S | Uncertain significance | 0.185 | benign | 해석 → | |
| G20D | Uncertain significance | 0.159 | benign | 해석 → | |
| G20S | Uncertain significance | 0.088 | benign | 해석 → | |
| G261R | Uncertain significance | 0.197 | benign | 해석 → | |
| G40D | Likely benign | 0.156 | benign | ✓ | 해석 → |
| G40S | Conflicting classifications of pathogeni | 0.084 | benign | 해석 → | |
| G66E | Uncertain significance | 0.962 | pathogenic | 해석 → | |
| H121Y | Uncertain significance | 0.291 | benign | 해석 → | |
| H125D | Uncertain significance | 0.175 | benign | 해석 → | |
| H125Y | Uncertain significance | 0.108 | benign | 해석 → | |
| H247D | Uncertain significance | 0.144 | benign | 해석 → | |
| H247P | Uncertain significance | 0.107 | benign | 해석 → | |
| H251Y | Conflicting classifications of pathogeni | 0.859 | pathogenic | 해석 → | |
| H277L | Uncertain significance | 0.599 | pathogenic | 해석 → | |
| H277R | Uncertain significance | 0.565 | pathogenic | 해석 → | |
| H282L | Uncertain significance | 0.131 | benign | 해석 → | |
| H348Y | Uncertain significance | 0.877 | pathogenic | 해석 → | |
| H41Q | Uncertain significance | 0.060 | benign | 해석 → | |
| H51Q | Uncertain significance | 0.090 | benign | 해석 → | |
| I178V | Uncertain significance | 0.241 | benign | 해석 → | |
| I27M | Uncertain significance | 0.410 | ambiguous | 해석 → | |
| I2F | Uncertain significance | 0.132 | benign | 해석 → | |
| I99V | Uncertain significance | 0.071 | benign | 해석 → | |
| K228R | Uncertain significance | 0.069 | benign | 해석 → | |
| K34R | Uncertain significance | 0.091 | benign | 해석 → | |
| K391E | Uncertain significance | 0.860 | pathogenic | 해석 → | |
| K75R | Uncertain significance | 0.071 | benign | 해석 → | |
| L144V | Uncertain significance | 0.096 | benign | 해석 → | |
| L195F | Uncertain significance | 0.151 | benign | 해석 → | |
| L234I | Uncertain significance | 0.159 | benign | 해석 → | |
| L384V | Uncertain significance | 0.947 | pathogenic | 해석 → | |
| L62V | Uncertain significance | 0.913 | pathogenic | 해석 → | |
| L67Q | Uncertain significance | 0.955 | pathogenic | 해석 → | |
| M64L | Uncertain significance | 0.415 | ambiguous | 해석 → | |
| M83R | Uncertain significance | 0.994 | pathogenic | 해석 → | |
| N128S | Uncertain significance | 0.081 | benign | 해석 → | |
| N135D | Uncertain significance | 0.085 | benign | 해석 → | |
| N150K | Uncertain significance | 0.193 | benign | 해석 → | |
| N208S | Uncertain significance | 0.119 | benign | 해석 → | |
| N231D | Uncertain significance | 0.828 | pathogenic | 해석 → | |
| N264S | Uncertain significance | 0.071 | benign | 해석 → | |
| N305Y | Uncertain significance | 0.183 | benign | 해석 → | |
| N353S | Uncertain significance | 0.615 | pathogenic | 해석 → | |
| N362S | Uncertain significance | 0.522 | ambiguous | 해석 → | |
| N365S | Uncertain significance | 0.229 | benign | 해석 → | |
| N5S | Uncertain significance | 0.097 | benign | 해석 → | |
| P110L | Uncertain significance | 0.118 | benign | 해석 → | |
| P148S | Uncertain significance | 0.656 | pathogenic | 해석 → | |
| P186T | Uncertain significance | 0.142 | benign | 해석 → | |
| P187L | Uncertain significance | 0.110 | benign | 해석 → | |
| P80R | Uncertain significance | 0.990 | pathogenic | 해석 → | |
| Q15E | Uncertain significance | 0.159 | benign | 해석 → | |
| Q243H | Uncertain significance | 0.125 | benign | 해석 → | |
| Q72L | Uncertain significance | 0.149 | benign | 해석 → | |
| Q72R | Conflicting classifications of pathogeni | 0.090 | benign | 해석 → | |
| Q98H | Uncertain significance | 0.088 | benign | 해석 → | |
| Q98R | Uncertain significance | 0.072 | benign | 해석 → | |
| R109H | Uncertain significance | 0.107 | benign | 해석 → | |
| R109P | Uncertain significance | 0.344 | ambiguous | 해석 → | |
| R113Q | Uncertain significance | 0.105 | benign | 해석 → | |
| R139H | Uncertain significance | 0.105 | benign | 해석 → | |
| R139L | Uncertain significance | 0.225 | benign | 해석 → | |
| R159Q | Uncertain significance | 0.288 | benign | 해석 → | |
| R159W | Uncertain significance | 0.482 | ambiguous | 해석 → | |
| R162Q | Conflicting classifications of pathogeni | 0.657 | pathogenic | 해석 → | |
| R162W | Uncertain significance | 0.865 | pathogenic | 해석 → | |
| R177C | Uncertain significance | 0.831 | pathogenic | 해석 → | |
| R177H | Uncertain significance | 0.634 | pathogenic | 해석 → | |
| R198Q | Uncertain significance | 0.192 | benign | 해석 → | |
| R211Q | Uncertain significance | 0.077 | benign | 해석 → | |
| R223C | Uncertain significance | 0.488 | ambiguous | 해석 → | |
| R223H | Uncertain significance | 0.175 | benign | 해석 → | |
| R226L | Uncertain significance | 0.126 | benign | 해석 → | |
| R226Q | Conflicting classifications of pathogeni | 0.065 | benign | 해석 → | |
| R245Q | Uncertain significance | 0.070 | benign | 해석 → | |
| R245W | Uncertain significance | 0.141 | benign | 해석 → | |
| R256Q | Uncertain significance | 0.584 | pathogenic | 해석 → | |
| R269Q | Likely benign | 0.314 | benign | ✓ | 해석 → |
| R280P | Uncertain significance | 0.701 | pathogenic | 해석 → | |
| R280Q | Uncertain significance | 0.104 | benign | 해석 → | |
| R280W | Conflicting classifications of pathogeni | 0.291 | benign | 해석 → | |
| R286Q | Uncertain significance | 0.119 | benign | 해석 → | |
| R287C | Uncertain significance | 0.484 | ambiguous | 해석 → | |
| R288Q | Conflicting classifications of pathogeni | 0.100 | benign | 해석 → | |
| R288W | Uncertain significance | 0.275 | benign | 해석 → | |
| R300Q | Uncertain significance | 0.130 | benign | 해석 → | |
| R300W | Conflicting classifications of pathogeni | 0.291 | benign | 해석 → | |
| R408H | Uncertain significance | 0.955 | pathogenic | 해석 → | |
| R55Q | Uncertain significance | 0.091 | benign | 해석 → | |
| R55W | Uncertain significance | 0.256 | benign | 해석 → | |
| R6Q | Uncertain significance | 0.364 | ambiguous | 해석 → | |
| R70C | Uncertain significance | 0.982 | pathogenic | 해석 → | |
| R84Q | Uncertain significance | 0.096 | benign | 해석 → | |
| R84W | Uncertain significance | 0.144 | benign | 해석 → | |
| R88W | Uncertain significance | 0.147 | benign | 해석 → | |
| S133N | Uncertain significance | 0.085 | benign | 해석 → | |
| S136C | Uncertain significance | 0.145 | benign | 해석 → | |
| S146G | Uncertain significance | 0.109 | benign | 해석 → | |
| S154F | Conflicting classifications of pathogeni | 0.608 | pathogenic | 해석 → | |
| S218R | Uncertain significance | 0.970 | pathogenic | 해석 → | |
| S255N | Uncertain significance | 0.624 | pathogenic | 해석 → | |
| S257L | Uncertain significance | 0.455 | ambiguous | 해석 → | |
| S257P | Uncertain significance | 0.785 | pathogenic | 해석 → | |
| S262N | Uncertain significance | 0.081 | benign | 해석 → | |
| S293G | Uncertain significance | 0.106 | benign | 해석 → | |
| S298A | Uncertain significance | 0.067 | benign | 해석 → | |
| S312L | Uncertain significance | 0.175 | benign | 해석 → | |
| S363F | Uncertain significance | 0.989 | pathogenic | 해석 → | |
| S367R | Conflicting classifications of pathogeni | 0.450 | ambiguous | 해석 → | |
| S74G | Uncertain significance | 0.070 | benign | 해석 → | |
| S76R | Benign | 0.283 | benign | ✓ | 해석 → |
| T102A | Uncertain significance | 0.057 | benign | 해석 → | |
| T102I | Conflicting classifications of pathogeni | 0.088 | benign | 해석 → | |
| T132A | Likely benign | 0.063 | benign | ✓ | 해석 → |
| T132S | Uncertain significance | 0.065 | benign | 해석 → | |
| T202M | Uncertain significance | 0.790 | pathogenic | 해석 → | |
| T225A | Conflicting classifications of pathogeni | 0.124 | benign | 해석 → | |
| T225S | Uncertain significance | 0.165 | benign | 해석 → | |
| T244I | Likely benign | 0.189 | benign | ✓ | 해석 → |
| T246S | Uncertain significance | 0.076 | benign | 해석 → | |
| T285I | Uncertain significance | 0.198 | benign | 해석 → | |
| T30A | Uncertain significance | 0.065 | benign | 해석 → | |
| T30M | Uncertain significance | 0.105 | benign | 해석 → | |
| T359I | Uncertain significance | 0.997 | pathogenic | 해석 → | |
| T376A | Uncertain significance | 0.853 | pathogenic | 해석 → | |
| V10F | Uncertain significance | 0.278 | benign | 해석 → | |
| V117L | Uncertain significance | 0.750 | pathogenic | 해석 → | |
| V152A | Benign/Likely benign | 0.132 | benign | ✓ | 해석 → |
| V183A | Uncertain significance | 0.768 | pathogenic | 해석 → | |
| V183I | Uncertain significance | 0.086 | benign | 해석 → | |
| V190M | Uncertain significance | 0.087 | benign | 해석 → | |
| V205A | Uncertain significance | 0.820 | pathogenic | 해석 → | |
| V273A | Uncertain significance | 0.894 | pathogenic | 해석 → | |
| V273I | Uncertain significance | 0.152 | benign | 해석 → | |
| V273L | Uncertain significance | 0.618 | pathogenic | 해석 → | |
| V327L | Uncertain significance | 0.899 | pathogenic | 해석 → | |
| V327M | Uncertain significance | 0.871 | pathogenic | 해석 → | |
| W224* | Uncertain significance | — | 미적재 | 해석 → | |
| Y397N | Uncertain significance | 0.994 | pathogenic | 해석 → | |
| L26M | - | 0.341 | ambiguous | 해석 → |
AM 임계: 병원성 ≥ 0.564, 양성 < 0.34 (AlphaMissense 권장 컷오프, Cheng et al. Science 2023)
📚 데이터: NCBI ClinVar variant_summary (GRCh38, 최근 다운로드) + 우리 유전자 서브셋만 추출.