ClinVar 임상 비교
AlphaMissense AI 예측 vs ClinVar 실제 임상 분류 — 일치/불일치 분석
ClinVar 변이 (서브셋)
319,822
우리 보유 유전자만
커버 유전자
308
병원성/가능 변이
56,770
AM과 교차 가능
154,518
단백질 변이 추출
ACE: AM vs ClinVar 일치도
432 변이✓ 둘 다 병원성
2
✓ 둘 다 양성
25
⚠ CV=병원성 / AM=양성
0
⚠ CV=양성 / AM=병원성
2
— AM 미적재
403
AM ↔ ClinVar 비교 가능 변이 29건 중 27건 일치 / 2건 불일치 — 일치도 93.1%
변이별 비교
Max 500| 변이 | ClinVar 분류 | AM 점수 | AM 분류 | 일치 | |
|---|---|---|---|---|---|
| E1046K | Conflicting classifications of pathogeni | 0.077 | benign | 해석 → | |
| E78* | Pathogenic/Likely pathogenic | — | 미적재 | 해석 → | |
| G1099D | Likely pathogenic | 0.990 | pathogenic | ✓ | 해석 → |
| L273F | Conflicting classifications of pathogeni | 0.336 | benign | 해석 → | |
| M1I | Likely pathogenic | 0.588 | pathogenic | ✓ | 해석 → |
| M1K | Likely pathogenic | 0.494 | ambiguous | 해석 → | |
| M1T | Pathogenic/Likely pathogenic | 0.435 | ambiguous | 해석 → | |
| P1228L | Uncertain significance | 0.559 | ambiguous | 해석 → | |
| Q1088* | Likely pathogenic | — | 미적재 | 해석 → | |
| Q1137* | Pathogenic | — | 미적재 | 해석 → | |
| Q1144* | Pathogenic | — | 미적재 | 해석 → | |
| Q1184* | Pathogenic | — | 미적재 | 해석 → | |
| Q138* | Pathogenic | — | 미적재 | 해석 → | |
| Q376* | Likely pathogenic | — | 미적재 | 해석 → | |
| Q396* | Pathogenic/Likely pathogenic | — | 미적재 | 해석 → | |
| Q582* | Pathogenic | — | 미적재 | 해석 → | |
| Q63* | Likely pathogenic | — | 미적재 | 해석 → | |
| Q688* | Likely pathogenic | — | 미적재 | 해석 → | |
| R259H | Conflicting classifications of pathogeni | 0.798 | pathogenic | 해석 → | |
| R265* | Pathogenic | — | 미적재 | 해석 → | |
| R496* | Pathogenic/Likely pathogenic | — | 미적재 | 해석 → | |
| R496Q | Likely pathogenic | 0.552 | ambiguous | 해석 → | |
| R508* | Pathogenic | — | 미적재 | 해석 → | |
| R791* | Pathogenic | — | 미적재 | 해석 → | |
| S683R | Conflicting classifications of pathogeni | 0.552 | ambiguous | 해석 → | |
| W1074* | Pathogenic | — | 미적재 | 해석 → | |
| W1091* | Pathogenic | — | 미적재 | 해석 → | |
| W290* | Pathogenic | — | 미적재 | 해석 → | |
| W69* | Pathogenic | — | 미적재 | 해석 → | |
| Y266* | Pathogenic/Likely pathogenic | — | 미적재 | 해석 → | |
| Y266* | Likely pathogenic | — | 미적재 | 해석 → | |
| A1017T | Uncertain significance | 0.942 | pathogenic | 해석 → | |
| A101T | Uncertain significance | 0.266 | benign | 해석 → | |
| A1194P | Uncertain significance | 0.404 | ambiguous | 해석 → | |
| A1194T | Uncertain significance | 0.151 | benign | 해석 → | |
| A1231T | Uncertain significance | 0.081 | benign | 해석 → | |
| A1252V | Uncertain significance | 0.096 | benign | 해석 → | |
| A154T | Benign | 0.084 | benign | ✓ | 해석 → |
| A154V | Uncertain significance | 0.185 | benign | 해석 → | |
| A183T | Likely benign | 0.075 | benign | ✓ | 해석 → |
| A195T | Uncertain significance | 0.072 | benign | 해석 → | |
| A214S | Uncertain significance | 0.232 | benign | 해석 → | |
| A214T | Uncertain significance | 0.541 | ambiguous | 해석 → | |
| A225S | Uncertain significance | 0.085 | benign | 해석 → | |
| A261S | Benign | 0.088 | benign | ✓ | 해석 → |
| A27V | Uncertain significance | 0.101 | benign | 해석 → | |
| A319S | Benign/Likely benign | 0.123 | benign | ✓ | 해석 → |
| A361T | Uncertain significance | 0.683 | pathogenic | 해석 → | |
| A363V | Uncertain significance | 0.781 | pathogenic | 해석 → | |
| A412T | Uncertain significance | 0.447 | ambiguous | 해석 → | |
| A425V | Uncertain significance | 0.422 | ambiguous | 해석 → | |
| A515S | Uncertain significance | 0.269 | benign | 해석 → | |
| A543T | Uncertain significance | 0.127 | benign | 해석 → | |
| A565T | Uncertain significance | 0.479 | ambiguous | 해석 → | |
| A596F | Uncertain significance | 0.625 | pathogenic | 해석 → | |
| A704G | Uncertain significance | 0.263 | benign | 해석 → | |
| A70V | Likely benign | 0.144 | benign | ✓ | 해석 → |
| A730E | Uncertain significance | 0.840 | pathogenic | 해석 → | |
| A731V | Uncertain significance | 0.113 | benign | 해석 → | |
| A731V | Uncertain significance | 0.113 | benign | 해석 → | |
| A866S | Uncertain significance | 0.064 | benign | 해석 → | |
| A885V | Uncertain significance | 0.933 | pathogenic | 해석 → | |
| A959D | Uncertain significance | 0.981 | pathogenic | 해석 → | |
| A959T | Uncertain significance | 0.776 | pathogenic | 해석 → | |
| A961P | Uncertain significance | 0.967 | pathogenic | 해석 → | |
| C359W | Uncertain significance | 0.990 | pathogenic | 해석 → | |
| C557R | Uncertain significance | 0.986 | pathogenic | 해석 → | |
| C763Y | Uncertain significance | 0.905 | pathogenic | 해석 → | |
| C975Y | Uncertain significance | 0.991 | pathogenic | 해석 → | |
| D1020G | Uncertain significance | 0.939 | pathogenic | 해석 → | |
| D1045H | Likely benign | 0.063 | benign | ✓ | 해석 → |
| D1045N | Uncertain significance | 0.064 | benign | 해석 → | |
| D1048G | Uncertain significance | 0.256 | benign | 해석 → | |
| D1058N | Uncertain significance | 0.193 | benign | 해석 → | |
| D1070H | Uncertain significance | 0.993 | pathogenic | 해석 → | |
| D1112G | Uncertain significance | 0.992 | pathogenic | 해석 → | |
| D1249A | Uncertain significance | 0.148 | benign | 해석 → | |
| D239Y | Uncertain significance | 0.212 | benign | 해석 → | |
| D295H | Uncertain significance | 0.248 | benign | 해석 → | |
| D302G | Uncertain significance | 0.064 | benign | 해석 → | |
| D353N | Conflicting classifications of pathogeni | 0.151 | benign | 해석 → | |
| D422N | Uncertain significance | 0.716 | pathogenic | 해석 → | |
| D42N | Uncertain significance | 0.105 | benign | 해석 → | |
| D441N | Uncertain significance | 0.092 | benign | 해석 → | |
| D514N | Uncertain significance | 0.911 | pathogenic | 해석 → | |
| D592G | Benign/Likely benign | 0.083 | benign | ✓ | 해석 → |
| D592N | Uncertain significance | 0.092 | benign | 해석 → | |
| D592V | Uncertain significance | 0.169 | benign | 해석 → | |
| D641V | Uncertain significance | 0.152 | benign | 해석 → | |
| D708Y | Uncertain significance | 0.227 | benign | 해석 → | |
| D72Y | Uncertain significance | 0.340 | ambiguous | 해석 → | |
| D746N | Uncertain significance | 0.085 | benign | 해석 → | |
| D769G | Uncertain significance | 0.123 | benign | 해석 → | |
| E1140K | Uncertain significance | 0.118 | benign | 해석 → | |
| E190G | Uncertain significance | 0.616 | pathogenic | 해석 → | |
| E205K | Uncertain significance | 0.066 | benign | 해석 → | |
| E341K | Uncertain significance | 0.237 | benign | 해석 → | |
| E341Q | Uncertain significance | 0.178 | benign | 해석 → | |
| E349A | Uncertain significance | 0.300 | benign | 해석 → | |
| E356K | Uncertain significance | 0.259 | benign | 해석 → | |
| E510K | Uncertain significance | 0.404 | ambiguous | 해석 → | |
| E638K | Uncertain significance | 0.086 | benign | 해석 → | |
| E666K | Uncertain significance | 0.104 | benign | 해석 → | |
| E669G | Uncertain significance | 0.339 | benign | 해석 → | |
| E669K | Likely benign | 0.150 | benign | ✓ | 해석 → |
| E681D | Uncertain significance | 0.101 | benign | 해석 → | |
| E748G | Uncertain significance | 0.520 | ambiguous | 해석 → | |
| E767K | Conflicting classifications of pathogeni | 0.674 | pathogenic | 해석 → | |
| E78Q | Uncertain significance | 0.133 | benign | 해석 → | |
| E85K | Uncertain significance | 0.136 | benign | 해석 → | |
| E92V | Uncertain significance | 0.254 | benign | 해석 → | |
| E947K | Uncertain significance | 0.304 | benign | 해석 → | |
| E989G | Uncertain significance | 0.965 | pathogenic | 해석 → | |
| F1136L | Uncertain significance | 0.996 | pathogenic | 해석 → | |
| F1201L | Uncertain significance | 0.982 | pathogenic | 해석 → | |
| F534L | Uncertain significance | 0.944 | pathogenic | 해석 → | |
| F538L | Uncertain significance | 0.995 | pathogenic | 해석 → | |
| F842S | Uncertain significance | 0.630 | pathogenic | 해석 → | |
| F996S | Uncertain significance | 0.907 | pathogenic | 해석 → | |
| G1013A | Uncertain significance | 0.351 | ambiguous | 해석 → | |
| G1013S | Uncertain significance | 0.619 | pathogenic | 해석 → | |
| G1150C | Uncertain significance | 0.776 | pathogenic | 해석 → | |
| G1164R | Uncertain significance | 0.954 | pathogenic | 해석 → | |
| G1241S | Conflicting classifications of pathogeni | 0.069 | benign | 해석 → | |
| G1275S | Uncertain significance | 0.124 | benign | 해석 → | |
| G128D | Uncertain significance | 0.772 | pathogenic | 해석 → | |
| G1298C | Uncertain significance | 0.268 | benign | 해석 → | |
| G197D | Uncertain significance | 0.955 | pathogenic | 해석 → | |
| G267R | Conflicting classifications of pathogeni | 0.442 | ambiguous | 해석 → | |
| G283R | Uncertain significance | 0.966 | pathogenic | 해석 → | |
| G2E | Uncertain significance | 0.273 | benign | 해석 → | |
| G2V | Benign | 0.368 | ambiguous | 해석 → | |
| G354R | Benign/Likely benign | 0.208 | benign | ✓ | 해석 → |
| G37R | Uncertain significance | 0.183 | benign | 해석 → | |
| G415S | Uncertain significance | 0.419 | ambiguous | 해석 → | |
| G438S | Uncertain significance | 0.127 | benign | 해석 → | |
| G501R | Uncertain significance | 0.985 | pathogenic | 해석 → | |
| G552D | Uncertain significance | 0.360 | ambiguous | 해석 → | |
| G566R | Uncertain significance | 0.936 | pathogenic | 해석 → | |
| G576A | Uncertain significance | 0.584 | pathogenic | 해석 → | |
| G590S | Likely benign | 0.116 | benign | ✓ | 해석 → |
| G618S | Uncertain significance | 0.083 | benign | 해석 → | |
| G639S | Uncertain significance | 0.100 | benign | 해석 → | |
| G639V | Uncertain significance | 0.173 | benign | 해석 → | |
| G6S | Uncertain significance | 0.209 | benign | 해석 → | |
| G865R | Uncertain significance | 0.608 | pathogenic | 해석 → | |
| G932R | Uncertain significance | 0.766 | pathogenic | 해석 → | |
| G98S | Uncertain significance | 0.354 | ambiguous | 해석 → | |
| G9R | Uncertain significance | 0.188 | benign | 해석 → | |
| H1015Q | Likely benign | 0.950 | pathogenic | ⚠ | 해석 → |
| H1047R | Uncertain significance | 0.080 | benign | 해석 → | |
| H1139D | Uncertain significance | 0.978 | pathogenic | 해석 → | |
| H1153Y | Uncertain significance | 0.109 | benign | 해석 → | |
| H1293Y | Uncertain significance | 0.093 | benign | 해석 → | |
| H193R | Uncertain significance | 0.212 | benign | 해석 → | |
| H512Y | Uncertain significance | 0.150 | benign | 해석 → | |
| H555Y | Uncertain significance | 0.098 | benign | 해석 → | |
| H71Q | Likely benign | 0.303 | benign | ✓ | 해석 → |
| H71Q | Uncertain significance | 0.303 | benign | 해석 → | |
| H71Y | Likely benign | 0.061 | benign | ✓ | 해석 → |
| H861L | Uncertain significance | 0.274 | benign | 해석 → | |
| H861Y | Uncertain significance | 0.076 | benign | 해석 → | |
| H987Y | Uncertain significance | 0.681 | pathogenic | 해석 → | |
| I1018T | Conflicting classifications of pathogeni | 0.481 | ambiguous | 해석 → | |
| I120T | Uncertain significance | 0.311 | benign | 해석 → | |
| I121V | Uncertain significance | 0.128 | benign | 해석 → | |
| I395M | Uncertain significance | 0.580 | pathogenic | 해석 → | |
| I420N | Uncertain significance | 0.954 | pathogenic | 해석 → | |
| I420T | Uncertain significance | 0.355 | ambiguous | 해석 → | |
| I451V | Uncertain significance | 0.107 | benign | 해석 → | |
| I678V | Uncertain significance | 0.208 | benign | 해석 → | |
| I75V | Uncertain significance | 0.170 | benign | 해석 → | |
| I798V | Likely benign | 0.081 | benign | ✓ | 해석 → |
| K1030N | Uncertain significance | 0.330 | benign | 해석 → | |
| K136T | Uncertain significance | 0.151 | benign | 해석 → | |
| K155N | Uncertain significance | 0.458 | ambiguous | 해석 → | |
| K201T | Uncertain significance | 0.655 | pathogenic | 해석 → | |
| K571N | Uncertain significance | 0.143 | benign | 해석 → | |
| K571T | Uncertain significance | 0.089 | benign | 해석 → | |
| K586E | Uncertain significance | 0.105 | benign | 해석 → | |
| K601R | Uncertain significance | 0.070 | benign | 해석 → | |
| K718R | Uncertain significance | 0.080 | benign | 해석 → | |
| K722N | Uncertain significance | 0.370 | ambiguous | 해석 → | |
| K922E | Uncertain significance | 0.075 | benign | 해석 → | |
| L1024F | Uncertain significance | 0.729 | pathogenic | 해석 → | |
| L1100F | Uncertain significance | 0.811 | pathogenic | 해석 → | |
| L1208P | Uncertain significance | 0.994 | pathogenic | 해석 → | |
| L1219P | Conflicting classifications of pathogeni | 0.170 | benign | 해석 → | |
| L127R | Uncertain significance | 0.262 | benign | 해석 → | |
| L13P | Uncertain significance | 0.058 | benign | 해석 → | |
| L168P | Uncertain significance | 0.725 | pathogenic | 해석 → | |
| L16P | Uncertain significance | 0.090 | benign | 해석 → | |
| L200P | Uncertain significance | 0.913 | pathogenic | 해석 → | |
| L22P | Uncertain significance | 0.070 | benign | 해석 → | |
| L254P | Uncertain significance | 0.994 | pathogenic | 해석 → | |
| L30F | Uncertain significance | 0.215 | benign | 해석 → | |
| L333Q | Uncertain significance | 0.806 | pathogenic | 해석 → | |
| L434V | Uncertain significance | 0.489 | ambiguous | 해석 → | |
| L439V | Uncertain significance | 0.405 | ambiguous | 해석 → | |
| L440Q | Uncertain significance | 0.406 | ambiguous | 해석 → |
AM 임계: 병원성 ≥ 0.564, 양성 < 0.34 (AlphaMissense 권장 컷오프, Cheng et al. Science 2023)
📚 데이터: NCBI ClinVar variant_summary (GRCh38, 최근 다운로드) + 우리 유전자 서브셋만 추출.