ClinVar 임상 비교
AlphaMissense AI 예측 vs ClinVar 실제 임상 분류 — 일치/불일치 분석
ClinVar 변이 (서브셋)
319,822
우리 보유 유전자만
커버 유전자
308
병원성/가능 변이
56,770
AM과 교차 가능
154,518
단백질 변이 추출
ADCY5: AM vs ClinVar 일치도
478 변이✓ 둘 다 병원성
23
✓ 둘 다 양성
27
⚠ CV=병원성 / AM=양성
0
⚠ CV=양성 / AM=병원성
4
— AM 미적재
424
AM ↔ ClinVar 비교 가능 변이 54건 중 50건 일치 / 4건 불일치 — 일치도 92.6%
변이별 비교
Max 500| 변이 | ClinVar 분류 | AM 점수 | AM 분류 | 일치 | |
|---|---|---|---|---|---|
| A441V | Likely pathogenic | 0.992 | pathogenic | ✓ | 해석 → |
| A726T | Pathogenic | 0.986 | pathogenic | ✓ | 해석 → |
| C977* | Pathogenic | — | 미적재 | 해석 → | |
| D1015E | Pathogenic | 0.999 | pathogenic | ✓ | 해석 → |
| D1015Y | Conflicting classifications of pathogeni | 0.997 | pathogenic | 해석 → | |
| D588N | Likely pathogenic | 0.963 | pathogenic | ✓ | 해석 → |
| E1025A | Likely pathogenic | 0.998 | pathogenic | ✓ | 해석 → |
| E1025G | Likely pathogenic | 0.996 | pathogenic | ✓ | 해석 → |
| I460F | Likely pathogenic | 0.995 | pathogenic | ✓ | 해석 → |
| I475M | Pathogenic | 0.939 | pathogenic | ✓ | 해석 → |
| K691E | Likely pathogenic | 0.811 | pathogenic | ✓ | 해석 → |
| K691M | Likely pathogenic | 0.883 | pathogenic | ✓ | 해석 → |
| K691N | Likely pathogenic | 0.952 | pathogenic | ✓ | 해석 → |
| M1029K | Pathogenic | 0.999 | pathogenic | ✓ | 해석 → |
| M696T | Likely pathogenic | 0.931 | pathogenic | ✓ | 해석 → |
| P527T | Likely pathogenic | 0.975 | pathogenic | ✓ | 해석 → |
| Q1021* | Likely pathogenic | — | 미적재 | 해석 → | |
| Q875* | Pathogenic | — | 미적재 | 해석 → | |
| R1013C | Pathogenic/Likely pathogenic | 0.996 | pathogenic | ✓ | 해석 → |
| R1208C | Uncertain significance | 0.998 | pathogenic | 해석 → | |
| R1238W | Pathogenic | 0.989 | pathogenic | ✓ | 해석 → |
| R412L | Likely pathogenic | 0.993 | pathogenic | ✓ | 해석 → |
| R418G | Likely pathogenic | 0.999 | pathogenic | ✓ | 해석 → |
| R418Q | Pathogenic | 0.992 | pathogenic | ✓ | 해석 → |
| R418W | Pathogenic | 0.997 | pathogenic | ✓ | 해석 → |
| R562H | Likely pathogenic | 0.997 | pathogenic | ✓ | 해석 → |
| R695P | Likely pathogenic | 0.886 | pathogenic | ✓ | 해석 → |
| R695W | Likely pathogenic | 0.547 | ambiguous | 해석 → | |
| R727G | Conflicting classifications of pathogeni | 0.995 | pathogenic | 해석 → | |
| R760* | Pathogenic | — | 미적재 | 해석 → | |
| S223* | Pathogenic | — | 미적재 | 해석 → | |
| S421* | Pathogenic/Likely pathogenic | — | 미적재 | 해석 → | |
| W330* | Likely pathogenic | — | 미적재 | 해석 → | |
| Y233H | Pathogenic | 0.999 | pathogenic | ✓ | 해석 → |
| Y888* | Likely pathogenic | — | 미적재 | 해석 → | |
| *1262C | Uncertain significance | — | 미적재 | 해석 → | |
| *1262S | Uncertain significance | — | 미적재 | 해석 → | |
| A1005T | Uncertain significance | 0.722 | pathogenic | 해석 → | |
| A102T | Conflicting classifications of pathogeni | 0.539 | ambiguous | 해석 → | |
| A1050T | Uncertain significance | 0.126 | benign | 해석 → | |
| A1071V | Uncertain significance | 0.942 | pathogenic | 해석 → | |
| A1075V | Uncertain significance | 0.948 | pathogenic | 해석 → | |
| A1078T | Uncertain significance | 0.130 | benign | 해석 → | |
| A1230T | Uncertain significance | 0.077 | benign | 해석 → | |
| A1230V | Uncertain significance | 0.099 | benign | 해석 → | |
| A141G | Uncertain significance | 0.065 | benign | 해석 → | |
| A141V | Uncertain significance | 0.118 | benign | 해석 → | |
| A143P | Uncertain significance | 0.076 | benign | 해석 → | |
| A146V | Uncertain significance | 0.104 | benign | 해석 → | |
| A169T | Conflicting classifications of pathogeni | 0.078 | benign | 해석 → | |
| A197V | Uncertain significance | 0.091 | benign | 해석 → | |
| A19T | Conflicting classifications of pathogeni | 0.075 | benign | 해석 → | |
| A201V | Uncertain significance | 0.098 | benign | 해석 → | |
| A211V | Uncertain significance | 0.150 | benign | 해석 → | |
| A247V | Likely benign | 0.206 | benign | ✓ | 해석 → |
| A277P | Uncertain significance | 0.903 | pathogenic | 해석 → | |
| A291T | Uncertain significance | 0.072 | benign | 해석 → | |
| A304T | Conflicting classifications of pathogeni | 0.077 | benign | 해석 → | |
| A307V | Uncertain significance | 0.079 | benign | 해석 → | |
| A325S | Uncertain significance | 0.316 | benign | 해석 → | |
| A349S | Uncertain significance | 0.230 | benign | 해석 → | |
| A370S | Uncertain significance | 0.077 | benign | 해석 → | |
| A370T | Uncertain significance | 0.076 | benign | 해석 → | |
| A407T | Uncertain significance | 0.870 | pathogenic | 해석 → | |
| A407V | Uncertain significance | 0.951 | pathogenic | 해석 → | |
| A450T | Uncertain significance | 0.232 | benign | 해석 → | |
| A45T | Uncertain significance | 0.067 | benign | 해석 → | |
| A499V | Uncertain significance | 0.996 | pathogenic | 해석 → | |
| A506S | Uncertain significance | 0.075 | benign | 해석 → | |
| A534G | Uncertain significance | 0.830 | pathogenic | 해석 → | |
| A630T | Conflicting classifications of pathogeni | 0.071 | benign | 해석 → | |
| A657T | Conflicting classifications of pathogeni | 0.247 | benign | 해석 → | |
| A706T | Conflicting classifications of pathogeni | 0.063 | benign | 해석 → | |
| A70P | Conflicting classifications of pathogeni | 0.080 | benign | 해석 → | |
| A710G | Likely benign | 0.093 | benign | ✓ | 해석 → |
| A710T | Uncertain significance | 0.068 | benign | 해석 → | |
| A710V | Benign | 0.072 | benign | ✓ | 해석 → |
| A768T | Uncertain significance | 0.160 | benign | 해석 → | |
| A878S | Conflicting classifications of pathogeni | 0.112 | benign | 해석 → | |
| A882V | Conflicting classifications of pathogeni | 0.071 | benign | 해석 → | |
| A90T | Uncertain significance | 0.075 | benign | 해석 → | |
| A920S | Uncertain significance | 0.165 | benign | 해석 → | |
| A958T | Uncertain significance | 0.176 | benign | 해석 → | |
| A964S | Conflicting classifications of pathogeni | 0.150 | benign | 해석 → | |
| A964T | Uncertain significance | 0.277 | benign | 해석 → | |
| A966T | Uncertain significance | 0.093 | benign | 해석 → | |
| C111W | Uncertain significance | 0.203 | benign | 해석 → | |
| C1237Y | Uncertain significance | 0.151 | benign | 해석 → | |
| C209R | Uncertain significance | 0.726 | pathogenic | 해석 → | |
| C288S | Uncertain significance | 0.671 | pathogenic | 해석 → | |
| C395Y | Uncertain significance | 0.927 | pathogenic | 해석 → | |
| C767W | Uncertain significance | 0.989 | pathogenic | 해석 → | |
| C812R | Uncertain significance | 0.764 | pathogenic | 해석 → | |
| C864F | Uncertain significance | 0.954 | pathogenic | 해석 → | |
| D1015H | Uncertain significance | 0.999 | pathogenic | 해석 → | |
| D1060E | Likely benign | 0.656 | pathogenic | ⚠ | 해석 → |
| D109E | Uncertain significance | 0.094 | benign | 해석 → | |
| D109E | Uncertain significance | 0.094 | benign | 해석 → | |
| D109G | Uncertain significance | 0.111 | benign | 해석 → | |
| D109V | Uncertain significance | 0.242 | benign | 해석 → | |
| D109Y | Benign/Likely benign | 0.273 | benign | ✓ | 해석 → |
| D110E | Likely benign | 0.131 | benign | ✓ | 해석 → |
| D1114G | Uncertain significance | 0.211 | benign | 해석 → | |
| D1137N | Uncertain significance | 0.142 | benign | 해석 → | |
| D1153N | Uncertain significance | 0.449 | ambiguous | 해석 → | |
| D1160H | Uncertain significance | 0.349 | ambiguous | 해석 → | |
| D1210H | Uncertain significance | 0.997 | pathogenic | 해석 → | |
| D1216N | Uncertain significance | 0.094 | benign | 해석 → | |
| D186H | Uncertain significance | 0.123 | benign | 해석 → | |
| D36N | Uncertain significance | 0.124 | benign | 해석 → | |
| D372E | Uncertain significance | 0.752 | pathogenic | 해석 → | |
| D372E | Uncertain significance | 0.752 | pathogenic | 해석 → | |
| D447H | Uncertain significance | 0.995 | pathogenic | 해석 → | |
| D583N | Uncertain significance | 0.999 | pathogenic | 해석 → | |
| D617V | Uncertain significance | 0.909 | pathogenic | 해석 → | |
| D703N | Uncertain significance | 0.240 | benign | 해석 → | |
| D725N | Uncertain significance | 0.971 | pathogenic | 해석 → | |
| D759N | Likely benign | 0.143 | benign | ✓ | 해석 → |
| D76H | Conflicting classifications of pathogeni | 0.201 | benign | 해석 → | |
| D77N | Uncertain significance | 0.115 | benign | 해석 → | |
| D77V | Uncertain significance | 0.207 | benign | 해석 → | |
| D78G | Likely benign | 0.093 | benign | ✓ | 해석 → |
| D80H | Uncertain significance | 0.161 | benign | 해석 → | |
| D87Y | Conflicting classifications of pathogeni | 0.141 | benign | 해석 → | |
| D892N | Conflicting classifications of pathogeni | 0.069 | benign | 해석 → | |
| D956N | Conflicting classifications of pathogeni | 0.281 | benign | 해석 → | |
| D968Y | Uncertain significance | 0.140 | benign | 해석 → | |
| E1025K | Uncertain significance | 0.999 | pathogenic | 해석 → | |
| E1028K | Uncertain significance | 0.988 | pathogenic | 해석 → | |
| E1092K | Uncertain significance | 0.970 | pathogenic | 해석 → | |
| E1113G | Uncertain significance | 0.520 | ambiguous | 해석 → | |
| E1248K | Uncertain significance | 0.559 | ambiguous | 해석 → | |
| E157D | Conflicting classifications of pathogeni | 0.349 | ambiguous | 해석 → | |
| E174K | Uncertain significance | 0.149 | benign | 해석 → | |
| E327D | Uncertain significance | 0.284 | benign | 해석 → | |
| E34Q | Uncertain significance | 0.195 | benign | 해석 → | |
| E410D | Uncertain significance | 0.959 | pathogenic | 해석 → | |
| E476K | Likely benign | 0.730 | pathogenic | ⚠ | 해석 → |
| E546A | Uncertain significance | 0.876 | pathogenic | 해석 → | |
| E619K | Uncertain significance | 0.238 | benign | 해석 → | |
| E619Q | Uncertain significance | 0.155 | benign | 해석 → | |
| E621G | Uncertain significance | 0.776 | pathogenic | 해석 → | |
| E627K | Uncertain significance | 0.146 | benign | 해석 → | |
| E634D | Conflicting classifications of pathogeni | 0.082 | benign | 해석 → | |
| E692K | Uncertain significance | 0.913 | pathogenic | 해석 → | |
| E708Q | Uncertain significance | 0.323 | benign | 해석 → | |
| E715D | Uncertain significance | 0.843 | pathogenic | 해석 → | |
| E746D | Benign | 0.232 | benign | ✓ | 해석 → |
| E940K | Conflicting classifications of pathogeni | 0.736 | pathogenic | 해석 → | |
| E979A | Uncertain significance | 0.093 | benign | 해석 → | |
| F1074L | Uncertain significance | 1.000 | pathogenic | 해석 → | |
| F1154C | Uncertain significance | 0.961 | pathogenic | 해석 → | |
| F1253L | Uncertain significance | 0.991 | pathogenic | 해석 → | |
| F216V | Uncertain significance | 0.904 | pathogenic | 해석 → | |
| F334V | Uncertain significance | 0.794 | pathogenic | 해석 → | |
| F805V | Uncertain significance | 0.264 | benign | 해석 → | |
| F816L | Uncertain significance | 0.946 | pathogenic | 해석 → | |
| F816V | Uncertain significance | 0.722 | pathogenic | 해석 → | |
| F970L | Uncertain significance | 0.298 | benign | 해석 → | |
| G107V | Uncertain significance | 0.217 | benign | 해석 → | |
| G1093S | Uncertain significance | 0.999 | pathogenic | 해석 → | |
| G112S | Uncertain significance | 0.086 | benign | 해석 → | |
| G114S | Uncertain significance | 0.099 | benign | 해석 → | |
| G1187R | Uncertain significance | 1.000 | pathogenic | 해석 → | |
| G1200V | Uncertain significance | 1.000 | pathogenic | 해석 → | |
| G121S | Likely benign | 0.109 | benign | ✓ | 해석 → |
| G125A | Uncertain significance | 0.090 | benign | 해석 → | |
| G126D | Uncertain significance | 0.170 | benign | 해석 → | |
| G134S | Conflicting classifications of pathogeni | 0.108 | benign | 해석 → | |
| G135A | Uncertain significance | 0.083 | benign | 해석 → | |
| G136A | Uncertain significance | 0.088 | benign | 해석 → | |
| G137R | Uncertain significance | 0.229 | benign | 해석 → | |
| G138R | Uncertain significance | 0.244 | benign | 해석 → | |
| G147S | Uncertain significance | 0.094 | benign | 해석 → | |
| G176R | Conflicting classifications of pathogeni | 0.134 | benign | 해석 → | |
| G181S | Uncertain significance | 0.084 | benign | 해석 → | |
| G185E | Uncertain significance | 0.090 | benign | 해석 → | |
| G25D | Uncertain significance | 0.188 | benign | 해석 → | |
| G316V | Likely benign | 0.534 | ambiguous | 해석 → | |
| G328C | Uncertain significance | 0.975 | pathogenic | 해석 → | |
| G328S | Conflicting classifications of pathogeni | 0.770 | pathogenic | 해석 → | |
| G3S | Uncertain significance | 0.091 | benign | 해석 → | |
| G47A | Uncertain significance | 0.072 | benign | 해석 → | |
| G47E | Uncertain significance | 0.126 | benign | 해석 → | |
| G47W | Uncertain significance | 0.179 | benign | 해석 → | |
| G52S | Uncertain significance | 0.078 | benign | 해석 → | |
| G541S | Uncertain significance | 0.995 | pathogenic | 해석 → | |
| G599S | Uncertain significance | 0.993 | pathogenic | 해석 → | |
| G59R | Uncertain significance | 0.123 | benign | 해석 → | |
| G626D | Uncertain significance | 0.411 | ambiguous | 해석 → | |
| G686D | Uncertain significance | 0.323 | benign | 해석 → | |
| G721A | Uncertain significance | 0.561 | ambiguous | 해석 → | |
| G85R | Uncertain significance | 0.126 | benign | 해석 → | |
| G973R | Uncertain significance | 0.271 | benign | 해석 → | |
| H260R | Uncertain significance | 0.450 | ambiguous | 해석 → | |
| H28Q | Uncertain significance | 0.152 | benign | 해석 → | |
| H28Q | Uncertain significance | 0.152 | benign | 해석 → | |
| H294Y | Uncertain significance | 0.251 | benign | 해석 → | |
| H44N | Likely benign | 0.072 | benign | ✓ | 해석 → |
| H44Y | Benign/Likely benign | 0.062 | benign | ✓ | 해석 → |
AM 임계: 병원성 ≥ 0.564, 양성 < 0.34 (AlphaMissense 권장 컷오프, Cheng et al. Science 2023)
📚 데이터: NCBI ClinVar variant_summary (GRCh38, 최근 다운로드) + 우리 유전자 서브셋만 추출.