ClinVar 임상 비교
AlphaMissense AI 예측 vs ClinVar 실제 임상 분류 — 일치/불일치 분석
ClinVar 변이 (서브셋)
319,822
우리 보유 유전자만
커버 유전자
308
병원성/가능 변이
56,770
AM과 교차 가능
154,518
단백질 변이 추출
AMH: AM vs ClinVar 일치도
194 변이✓ 둘 다 병원성
8
✓ 둘 다 양성
21
⚠ CV=병원성 / AM=양성
1
⚠ CV=양성 / AM=병원성
0
— AM 미적재
164
AM ↔ ClinVar 비교 가능 변이 30건 중 29건 일치 / 1건 불일치 — 일치도 96.7%
변이별 비교
Max 500| 변이 | ClinVar 분류 | AM 점수 | AM 분류 | 일치 | |
|---|---|---|---|---|---|
| *561C | Likely pathogenic | — | 미적재 | 해석 → | |
| C188Y | Pathogenic | 0.880 | pathogenic | ✓ | 해석 → |
| E382* | Pathogenic | — | 미적재 | 해석 → | |
| E389* | Pathogenic/Likely pathogenic | — | 미적재 | 해석 → | |
| G101R | Likely pathogenic | 0.904 | pathogenic | ✓ | 해석 → |
| L339P | Likely pathogenic | 0.860 | pathogenic | ✓ | 해석 → |
| P151S | Pathogenic | 0.334 | benign | ⚠ | 해석 → |
| P550L | Likely pathogenic | 0.614 | pathogenic | ✓ | 해석 → |
| Q217* | Pathogenic | — | 미적재 | 해석 → | |
| Q384* | Pathogenic | — | 미적재 | 해석 → | |
| R191* | Pathogenic | — | 미적재 | 해석 → | |
| R302Q | Conflicting classifications of pathogeni | 0.160 | benign | 해석 → | |
| R40* | Pathogenic/Likely pathogenic | — | 미적재 | 해석 → | |
| R465C | Likely pathogenic | 0.487 | ambiguous | 해석 → | |
| R472C | Likely pathogenic | 0.714 | pathogenic | ✓ | 해석 → |
| S331L | Likely pathogenic | 0.492 | ambiguous | 해석 → | |
| V477A | Likely pathogenic | 0.883 | pathogenic | ✓ | 해석 → |
| W371* | Pathogenic | — | 미적재 | 해석 → | |
| Y167C | Pathogenic | 0.877 | pathogenic | ✓ | 해석 → |
| Y503H | Pathogenic | 0.881 | pathogenic | ✓ | 해석 → |
| A156T | Conflicting classifications of pathogeni | 0.079 | benign | 해석 → | |
| A162V | Uncertain significance | 0.267 | benign | 해석 → | |
| A18T | Uncertain significance | 0.080 | benign | 해석 → | |
| A18V | Likely benign | 0.081 | benign | ✓ | 해석 → |
| A204V | Uncertain significance | 0.116 | benign | 해석 → | |
| A206P | Uncertain significance | 0.391 | ambiguous | 해석 → | |
| A206V | Uncertain significance | 0.215 | benign | 해석 → | |
| A228S | Uncertain significance | 0.090 | benign | 해석 → | |
| A306T | Uncertain significance | 0.077 | benign | 해석 → | |
| A319V | Likely benign | 0.120 | benign | ✓ | 해석 → |
| A31S | Uncertain significance | 0.088 | benign | 해석 → | |
| A31T | Uncertain significance | 0.077 | benign | 해석 → | |
| A321T | Uncertain significance | 0.107 | benign | 해석 → | |
| A354V | Uncertain significance | 0.110 | benign | 해석 → | |
| A372T | Uncertain significance | 0.088 | benign | 해석 → | |
| A372V | Likely benign | 0.129 | benign | ✓ | 해석 → |
| A376V | Uncertain significance | 0.108 | benign | 해석 → | |
| A385V | Uncertain significance | 0.104 | benign | 해석 → | |
| A405P | Uncertain significance | 0.229 | benign | 해석 → | |
| A457S | Uncertain significance | 0.083 | benign | 해석 → | |
| A463V | Uncertain significance | 0.140 | benign | 해석 → | |
| A518G | Uncertain significance | 0.154 | benign | 해석 → | |
| A518T | Uncertain significance | 0.086 | benign | 해석 → | |
| A519V | Likely benign | 0.096 | benign | ✓ | 해석 → |
| A521V | Likely benign | 0.176 | benign | ✓ | 해석 → |
| A530V | Uncertain significance | 0.255 | benign | 해석 → | |
| A554T | Uncertain significance | 0.931 | pathogenic | 해석 → | |
| A78T | Uncertain significance | 0.073 | benign | 해석 → | |
| C488R | Uncertain significance | 0.994 | pathogenic | 해석 → | |
| D192G | Uncertain significance | 0.147 | benign | 해석 → | |
| D238A | Uncertain significance | 0.515 | ambiguous | 해석 → | |
| D238H | Uncertain significance | 0.644 | pathogenic | 해석 → | |
| D288E | Conflicting classifications of pathogeni | 0.538 | ambiguous | 해석 → | |
| D332A | Uncertain significance | 0.445 | ambiguous | 해석 → | |
| D332G | Uncertain significance | 0.743 | pathogenic | 해석 → | |
| D332H | Uncertain significance | 0.492 | ambiguous | 해석 → | |
| D359N | Uncertain significance | 0.106 | benign | 해석 → | |
| D365Y | Uncertain significance | 0.148 | benign | 해석 → | |
| D459H | Uncertain significance | 0.198 | benign | 해석 → | |
| D459Y | Uncertain significance | 0.237 | benign | 해석 → | |
| E160D | Uncertain significance | 0.114 | benign | 해석 → | |
| E160Q | Uncertain significance | 0.135 | benign | 해석 → | |
| E256K | Uncertain significance | 0.097 | benign | 해석 → | |
| E256Q | Uncertain significance | 0.075 | benign | 해석 → | |
| E389A | Uncertain significance | 0.185 | benign | 해석 → | |
| E466D | Uncertain significance | 0.410 | ambiguous | 해석 → | |
| E466K | Uncertain significance | 0.522 | ambiguous | 해석 → | |
| F148L | Uncertain significance | 0.990 | pathogenic | 해석 → | |
| F323L | Uncertain significance | 0.813 | pathogenic | 해석 → | |
| G106S | Benign | 0.082 | benign | ✓ | 해석 → |
| G157D | Likely benign | 0.074 | benign | ✓ | 해석 → |
| G209S | Uncertain significance | 0.100 | benign | 해석 → | |
| G236R | Uncertain significance | 0.472 | ambiguous | 해석 → | |
| G264R | Uncertain significance | 0.266 | benign | 해석 → | |
| G326S | Uncertain significance | 0.142 | benign | 해석 → | |
| G417D | Uncertain significance | 0.076 | benign | 해석 → | |
| G417R | Uncertain significance | 0.141 | benign | 해석 → | |
| G419R | Uncertain significance | 0.274 | benign | 해석 → | |
| G460R | Uncertain significance | 0.230 | benign | 해석 → | |
| G93V | Uncertain significance | 0.217 | benign | 해석 → | |
| H364R | Uncertain significance | 0.056 | benign | 해석 → | |
| H506Q | Uncertain significance | 0.987 | pathogenic | 해석 → | |
| H548Y | Uncertain significance | 0.148 | benign | 해석 → | |
| L11V | Uncertain significance | 0.080 | benign | 해석 → | |
| L233R | Uncertain significance | 0.430 | ambiguous | 해석 → | |
| L25F | Uncertain significance | 0.096 | benign | 해석 → | |
| L320P | Uncertain significance | 0.415 | ambiguous | 해석 → | |
| L404M | Uncertain significance | 0.400 | ambiguous | 해석 → | |
| L404P | Uncertain significance | 0.720 | pathogenic | 해석 → | |
| L404R | Uncertain significance | 0.678 | pathogenic | 해석 → | |
| L410F | Uncertain significance | 0.147 | benign | 해석 → | |
| L428R | Uncertain significance | 0.545 | ambiguous | 해석 → | |
| L43S | Uncertain significance | 0.098 | benign | 해석 → | |
| L535V | Uncertain significance | 0.128 | benign | 해석 → | |
| L76P | Uncertain significance | 0.147 | benign | 해석 → | |
| L84P | Uncertain significance | 0.680 | pathogenic | 해석 → | |
| L84Q | Uncertain significance | 0.797 | pathogenic | 해석 → | |
| L9M | Uncertain significance | 0.123 | benign | 해석 → | |
| M513T | Conflicting classifications of pathogeni | 0.946 | pathogenic | 해석 → | |
| N104H | Uncertain significance | 0.091 | benign | 해석 → | |
| N104T | Likely benign | 0.078 | benign | ✓ | 해석 → |
| N487S | Uncertain significance | 0.576 | pathogenic | 해석 → | |
| N64S | Uncertain significance | 0.085 | benign | 해석 → | |
| P144A | Uncertain significance | 0.132 | benign | 해석 → | |
| P144S | Uncertain significance | 0.373 | ambiguous | 해석 → | |
| P158S | Uncertain significance | 0.070 | benign | 해석 → | |
| P168S | Uncertain significance | 0.247 | benign | 해석 → | |
| P168T | Uncertain significance | 0.200 | benign | 해석 → | |
| P182T | Uncertain significance | 0.094 | benign | 해석 → | |
| P189L | Likely benign | 0.067 | benign | ✓ | 해석 → |
| P203S | Uncertain significance | 0.364 | ambiguous | 해석 → | |
| P261L | Uncertain significance | 0.131 | benign | 해석 → | |
| P270S | Benign/Likely benign | 0.135 | benign | ✓ | 해석 → |
| P274R | Uncertain significance | 0.093 | benign | 해석 → | |
| P284S | Uncertain significance | 0.081 | benign | 해석 → | |
| P285S | Uncertain significance | 0.084 | benign | 해석 → | |
| P304T | Uncertain significance | 0.083 | benign | 해석 → | |
| P311L | Uncertain significance | 0.109 | benign | 해석 → | |
| P317R | Conflicting classifications of pathogeni | 0.141 | benign | 해석 → | |
| P317S | Uncertain significance | 0.150 | benign | 해석 → | |
| P345S | Uncertain significance | 0.401 | ambiguous | 해석 → | |
| P352L | Uncertain significance | 0.200 | benign | 해석 → | |
| P352S | Uncertain significance | 0.111 | benign | 해석 → | |
| P360L | Uncertain significance | 0.083 | benign | 해석 → | |
| P366L | Uncertain significance | 0.122 | benign | 해석 → | |
| P366R | Uncertain significance | 0.085 | benign | 해석 → | |
| P370L | Uncertain significance | 0.106 | benign | 해석 → | |
| P394L | Uncertain significance | 0.278 | benign | 해석 → | |
| P398L | Uncertain significance | 0.119 | benign | 해석 → | |
| P398T | Uncertain significance | 0.095 | benign | 해석 → | |
| P402L | Uncertain significance | 0.175 | benign | 해석 → | |
| P402T | Uncertain significance | 0.129 | benign | 해석 → | |
| P446R | Uncertain significance | 0.076 | benign | 해석 → | |
| P46A | Uncertain significance | 0.076 | benign | 해석 → | |
| P46H | Uncertain significance | 0.108 | benign | 해석 → | |
| P501R | Uncertain significance | 0.288 | benign | 해석 → | |
| P94L | Uncertain significance | 0.116 | benign | 해석 → | |
| P94S | Uncertain significance | 0.096 | benign | 해석 → | |
| Q185E | Likely benign | 0.224 | benign | ✓ | 해석 → |
| Q185H | Uncertain significance | 0.866 | pathogenic | 해석 → | |
| Q325R | Benign/Likely benign | 0.150 | benign | ✓ | 해석 → |
| R108G | Uncertain significance | 0.056 | benign | 해석 → | |
| R116W | Uncertain significance | 0.126 | benign | 해석 → | |
| R117Q | Benign/Likely benign | 0.071 | benign | ✓ | 해석 → |
| R117W | Uncertain significance | 0.103 | benign | 해석 → | |
| R123Q | Benign | 0.084 | benign | ✓ | 해석 → |
| R129C | Uncertain significance | 0.211 | benign | 해석 → | |
| R129H | Uncertain significance | 0.089 | benign | 해석 → | |
| R194C | Uncertain significance | 0.271 | benign | 해석 → | |
| R202C | Uncertain significance | 0.217 | benign | 해석 → | |
| R219H | Uncertain significance | 0.113 | benign | 해석 → | |
| R240C | Uncertain significance | 0.300 | benign | 해석 → | |
| R26G | Uncertain significance | 0.058 | benign | 해석 → | |
| R26T | Uncertain significance | 0.094 | benign | 해석 → | |
| R2Q | Conflicting classifications of pathogeni | 0.085 | benign | 해석 → | |
| R302W | Uncertain significance | 0.257 | benign | 해석 → | |
| R307Q | Uncertain significance | 0.083 | benign | 해석 → | |
| R312H | Uncertain significance | 0.112 | benign | 해석 → | |
| R338H | Uncertain significance | 0.098 | benign | 해석 → | |
| R351K | Uncertain significance | 0.179 | benign | 해석 → | |
| R441L | Uncertain significance | 0.141 | benign | 해석 → | |
| R441P | Uncertain significance | 0.176 | benign | 해석 → | |
| R451H | Uncertain significance | 0.307 | benign | 해석 → | |
| R475H | Uncertain significance | 0.095 | benign | 해석 → | |
| R502L | Uncertain significance | 0.155 | benign | 해석 → | |
| R522P | Uncertain significance | 0.874 | pathogenic | 해석 → | |
| R560G | Uncertain significance | 0.944 | pathogenic | 해석 → | |
| R91H | Uncertain significance | 0.082 | benign | 해석 → | |
| R95Q | Likely benign | 0.076 | benign | ✓ | 해석 → |
| S114P | Uncertain significance | 0.075 | benign | 해석 → | |
| S223F | Uncertain significance | 0.174 | benign | 해석 → | |
| S331P | Conflicting classifications of pathogeni | 0.635 | pathogenic | 해석 → | |
| S368L | Uncertain significance | 0.141 | benign | 해석 → | |
| S476P | Uncertain significance | 0.831 | pathogenic | 해석 → | |
| S49I | Benign | 0.081 | benign | ✓ | 해석 → |
| S540L | Uncertain significance | 0.432 | ambiguous | 해석 → | |
| S8T | Uncertain significance | 0.079 | benign | 해석 → | |
| T105P | Likely benign | 0.044 | benign | ✓ | 해석 → |
| T143I | Benign | 0.134 | benign | ✓ | 해석 → |
| T215A | Uncertain significance | 0.106 | benign | 해석 → | |
| T268A | Uncertain significance | 0.075 | benign | 해석 → | |
| T268I | Uncertain significance | 0.143 | benign | 해석 → | |
| T293M | Uncertain significance | 0.202 | benign | 해석 → | |
| T373P | Uncertain significance | 0.065 | benign | 해석 → | |
| T99S | Uncertain significance | 0.151 | benign | 해석 → | |
| V102I | Benign | 0.076 | benign | ✓ | 해석 → |
| V12G | Uncertain significance | 0.097 | benign | 해석 → | |
| V131L | Likely benign | 0.108 | benign | ✓ | 해석 → |
| V515A | Benign | 0.036 | benign | ✓ | 해석 → |
| V553A | Uncertain significance | 0.787 | pathogenic | 해석 → | |
| V553L | Uncertain significance | 0.870 | pathogenic | 해석 → | |
| W371R | Uncertain significance | 0.749 | pathogenic | 해석 → | |
| W438L | Uncertain significance | 0.388 | ambiguous | 해석 → | |
| Y483H | Uncertain significance | 0.990 | pathogenic | 해석 → |
AM 임계: 병원성 ≥ 0.564, 양성 < 0.34 (AlphaMissense 권장 컷오프, Cheng et al. Science 2023)
📚 데이터: NCBI ClinVar variant_summary (GRCh38, 최근 다운로드) + 우리 유전자 서브셋만 추출.