ClinVar 임상 비교
AlphaMissense AI 예측 vs ClinVar 실제 임상 분류 — 일치/불일치 분석
ClinVar 변이 (서브셋)
319,822
우리 보유 유전자만
커버 유전자
308
병원성/가능 변이
56,770
AM과 교차 가능
154,518
단백질 변이 추출
CELSR1: AM vs ClinVar 일치도
500 변이✓ 둘 다 병원성
1
✓ 둘 다 양성
48
⚠ CV=병원성 / AM=양성
1
⚠ CV=양성 / AM=병원성
1
— AM 미적재
449
AM ↔ ClinVar 비교 가능 변이 51건 중 49건 일치 / 2건 불일치 — 일치도 96.1%
변이별 비교
Max 500| 변이 | ClinVar 분류 | AM 점수 | AM 분류 | 일치 | |
|---|---|---|---|---|---|
| D1201N | Conflicting classifications of pathogeni | 0.088 | benign | 해석 → | |
| E290* | Likely pathogenic | — | 미적재 | 해석 → | |
| L1479H | Conflicting classifications of pathogeni | 0.994 | pathogenic | 해석 → | |
| L979F | Likely pathogenic | 0.147 | benign | ⚠ | 해석 → |
| R1838* | Likely pathogenic | — | 미적재 | 해석 → | |
| T1472S | Conflicting classifications of pathogeni | 0.368 | ambiguous | 해석 → | |
| V673A | Likely pathogenic | 0.876 | pathogenic | ✓ | 해석 → |
| W1957* | Pathogenic | — | 미적재 | 해석 → | |
| A1019S | Benign | 0.170 | benign | ✓ | 해석 → |
| A1032T | Uncertain significance | 0.705 | pathogenic | 해석 → | |
| A107E | Uncertain significance | 0.147 | benign | 해석 → | |
| A116T | Uncertain significance | 0.090 | benign | 해석 → | |
| A1174E | Uncertain significance | 0.852 | pathogenic | 해석 → | |
| A118V | Uncertain significance | 0.091 | benign | 해석 → | |
| A1233T | Likely benign | 0.062 | benign | ✓ | 해석 → |
| A1374G | Uncertain significance | 0.092 | benign | 해석 → | |
| A1374T | Uncertain significance | 0.071 | benign | 해석 → | |
| A1402T | Uncertain significance | 0.067 | benign | 해석 → | |
| A141V | Uncertain significance | 0.101 | benign | 해석 → | |
| A142G | Uncertain significance | 0.074 | benign | 해석 → | |
| A1648T | Uncertain significance | 0.108 | benign | 해석 → | |
| A16T | Uncertain significance | 0.229 | benign | 해석 → | |
| A1826T | Uncertain significance | 0.068 | benign | 해석 → | |
| A1861T | Uncertain significance | 0.423 | ambiguous | 해석 → | |
| A1890P | Uncertain significance | 0.265 | benign | 해석 → | |
| A203V | Uncertain significance | 0.111 | benign | 해석 → | |
| A205V | Uncertain significance | 0.096 | benign | 해석 → | |
| A2075V | Benign | 0.251 | benign | ✓ | 해석 → |
| A2137V | Uncertain significance | 0.101 | benign | 해석 → | |
| A2181T | Conflicting classifications of pathogeni | 0.091 | benign | 해석 → | |
| A2193T | Uncertain significance | 0.083 | benign | 해석 → | |
| A2201T | Uncertain significance | 0.073 | benign | 해석 → | |
| A2228E | Uncertain significance | 0.714 | pathogenic | 해석 → | |
| A225V | Uncertain significance | 0.075 | benign | 해석 → | |
| A2337T | Uncertain significance | 0.189 | benign | 해석 → | |
| A2339V | Uncertain significance | 0.136 | benign | 해석 → | |
| A2399T | Likely benign | 0.068 | benign | ✓ | 해석 → |
| A2419V | Uncertain significance | 0.079 | benign | 해석 → | |
| A2442T | Likely benign | 0.064 | benign | ✓ | 해석 → |
| A2442V | Uncertain significance | 0.084 | benign | 해석 → | |
| A2475T | Uncertain significance | 0.091 | benign | 해석 → | |
| A2486P | Uncertain significance | 0.504 | ambiguous | 해석 → | |
| A2508S | Uncertain significance | 0.107 | benign | 해석 → | |
| A2547V | Uncertain significance | 0.334 | benign | 해석 → | |
| A2616V | Uncertain significance | 0.093 | benign | 해석 → | |
| A2657S | Uncertain significance | 0.068 | benign | 해석 → | |
| A2657T | Uncertain significance | 0.096 | benign | 해석 → | |
| A2666T | Uncertain significance | 0.091 | benign | 해석 → | |
| A269V | Uncertain significance | 0.548 | ambiguous | 해석 → | |
| A2913T | Likely benign | 0.065 | benign | ✓ | 해석 → |
| A2955T | Uncertain significance | 0.075 | benign | 해석 → | |
| A2977T | Uncertain significance | 0.066 | benign | 해석 → | |
| A29V | Uncertain significance | 0.142 | benign | 해석 → | |
| A325S | Uncertain significance | 0.596 | pathogenic | 해석 → | |
| A396S | Uncertain significance | 0.078 | benign | 해석 → | |
| A41V | Uncertain significance | 0.111 | benign | 해석 → | |
| A43P | Uncertain significance | 0.082 | benign | 해석 → | |
| A43S | Uncertain significance | 0.089 | benign | 해석 → | |
| A492S | Uncertain significance | 0.183 | benign | 해석 → | |
| A492T | Uncertain significance | 0.809 | pathogenic | 해석 → | |
| A504V | Likely benign | 0.167 | benign | ✓ | 해석 → |
| A608T | Uncertain significance | 0.068 | benign | 해석 → | |
| A617S | Uncertain significance | 0.072 | benign | 해석 → | |
| A617T | Uncertain significance | 0.065 | benign | 해석 → | |
| A659V | Uncertain significance | 0.385 | ambiguous | 해석 → | |
| A700V | Uncertain significance | 0.236 | benign | 해석 → | |
| A74T | Uncertain significance | 0.100 | benign | 해석 → | |
| A761V | Uncertain significance | 0.109 | benign | 해석 → | |
| A773V | Benign | 0.096 | benign | ✓ | 해석 → |
| A857T | Uncertain significance | 0.078 | benign | 해석 → | |
| A94V | Uncertain significance | 0.139 | benign | 해석 → | |
| A962V | Uncertain significance | 0.235 | benign | 해석 → | |
| A97S | Uncertain significance | 0.087 | benign | 해석 → | |
| A981S | Uncertain significance | 0.084 | benign | 해석 → | |
| A981T | Uncertain significance | 0.090 | benign | 해석 → | |
| C1126Y | Uncertain significance | 0.085 | benign | 해석 → | |
| C139G | Likely benign | 0.038 | benign | ✓ | 해석 → |
| C139R | Likely benign | 0.070 | benign | ✓ | 해석 → |
| C1653Y | Uncertain significance | 0.966 | pathogenic | 해석 → | |
| C1673G | Uncertain significance | 0.914 | pathogenic | 해석 → | |
| C185* | Uncertain significance | — | 미적재 | 해석 → | |
| C1987R | Uncertain significance | 0.989 | pathogenic | 해석 → | |
| C2036Y | Uncertain significance | 0.995 | pathogenic | 해석 → | |
| C2531G | Uncertain significance | 0.958 | pathogenic | 해석 → | |
| C2797S | Benign | 0.062 | benign | ✓ | 해석 → |
| C2976G | Likely benign | 0.045 | benign | ✓ | 해석 → |
| D1050N | Uncertain significance | 0.298 | benign | 해석 → | |
| D1136N | Likely benign | 0.374 | ambiguous | 해석 → | |
| D1165N | Uncertain significance | 0.138 | benign | 해석 → | |
| D1252E | Uncertain significance | 0.333 | benign | 해석 → | |
| D1303N | Uncertain significance | 0.824 | pathogenic | 해석 → | |
| D1370E | Uncertain significance | 0.114 | benign | 해석 → | |
| D1370G | Uncertain significance | 0.086 | benign | 해석 → | |
| D1370N | Likely benign | 0.056 | benign | ✓ | 해석 → |
| D1498E | Uncertain significance | 0.112 | benign | 해석 → | |
| D1609Y | Uncertain significance | 0.183 | benign | 해석 → | |
| D1771N | Likely benign | 0.174 | benign | ✓ | 해석 → |
| D1808Y | Uncertain significance | 0.121 | benign | 해석 → | |
| D1874G | Uncertain significance | 0.243 | benign | 해석 → | |
| D1893Y | Uncertain significance | 0.130 | benign | 해석 → | |
| D1899G | Uncertain significance | 0.139 | benign | 해석 → | |
| D1899N | Uncertain significance | 0.080 | benign | 해석 → | |
| D1977E | Conflicting classifications of pathogeni | 0.312 | benign | 해석 → | |
| D2004N | Uncertain significance | 0.120 | benign | 해석 → | |
| D2016N | Uncertain significance | 0.099 | benign | 해석 → | |
| D2037N | Uncertain significance | 0.499 | ambiguous | 해석 → | |
| D2182N | Uncertain significance | 0.065 | benign | 해석 → | |
| D2267N | Uncertain significance | 0.088 | benign | 해석 → | |
| D2286G | Uncertain significance | 0.117 | benign | 해석 → | |
| D2286N | Uncertain significance | 0.108 | benign | 해석 → | |
| D2358N | Uncertain significance | 0.333 | benign | 해석 → | |
| D2567N | Uncertain significance | 0.142 | benign | 해석 → | |
| D2678N | Uncertain significance | 0.172 | benign | 해석 → | |
| D2804N | Uncertain significance | 0.163 | benign | 해석 → | |
| D2831N | Uncertain significance | 0.103 | benign | 해석 → | |
| D2865N | Uncertain significance | 0.073 | benign | 해석 → | |
| D2956N | Uncertain significance | 0.082 | benign | 해석 → | |
| D2975N | Uncertain significance | 0.093 | benign | 해석 → | |
| D3007A | Uncertain significance | 0.065 | benign | 해석 → | |
| D3007N | Uncertain significance | 0.075 | benign | 해석 → | |
| D312N | Uncertain significance | 0.858 | pathogenic | 해석 → | |
| D431N | Uncertain significance | 0.981 | pathogenic | 해석 → | |
| D451N | Uncertain significance | 0.977 | pathogenic | 해석 → | |
| D557G | Uncertain significance | 0.984 | pathogenic | 해석 → | |
| D66H | Uncertain significance | 0.165 | benign | 해석 → | |
| D70H | Uncertain significance | 0.141 | benign | 해석 → | |
| D884N | Uncertain significance | 0.894 | pathogenic | 해석 → | |
| D936N | Uncertain significance | 0.249 | benign | 해석 → | |
| E1009G | Uncertain significance | 0.142 | benign | 해석 → | |
| E1069K | Uncertain significance | 0.158 | benign | 해석 → | |
| E1147K | Uncertain significance | 0.350 | ambiguous | 해석 → | |
| E1177A | Uncertain significance | 0.129 | benign | 해석 → | |
| E1177V | Uncertain significance | 0.181 | benign | 해석 → | |
| E1313K | Uncertain significance | 0.220 | benign | 해석 → | |
| E1391Q | Likely benign | 0.072 | benign | ✓ | 해석 → |
| E1499K | Likely benign | 0.132 | benign | ✓ | 해석 → |
| E1773D | Uncertain significance | 0.180 | benign | 해석 → | |
| E1780K | Uncertain significance | 0.310 | benign | 해석 → | |
| E2123Q | Uncertain significance | 0.127 | benign | 해석 → | |
| E2210K | Uncertain significance | 0.218 | benign | 해석 → | |
| E2276Q | Uncertain significance | 0.159 | benign | 해석 → | |
| E2293G | Uncertain significance | 0.063 | benign | 해석 → | |
| E2293K | Benign | 0.067 | benign | ✓ | 해석 → |
| E2318K | Uncertain significance | 0.085 | benign | 해석 → | |
| E2432K | Uncertain significance | 0.169 | benign | 해석 → | |
| E2757K | Uncertain significance | 0.179 | benign | 해석 → | |
| E276* | Uncertain significance | — | 미적재 | 해석 → | |
| E2815G | Uncertain significance | 0.192 | benign | 해석 → | |
| E2815V | Uncertain significance | 0.435 | ambiguous | 해석 → | |
| E2829K | Uncertain significance | 0.228 | benign | 해석 → | |
| E2895K | Uncertain significance | 0.095 | benign | 해석 → | |
| E2903Q | Benign | 0.078 | benign | ✓ | 해석 → |
| E2958K | Uncertain significance | 0.076 | benign | 해석 → | |
| E367G | Uncertain significance | 0.472 | ambiguous | 해석 → | |
| E404D | Uncertain significance | 0.124 | benign | 해석 → | |
| E404K | Uncertain significance | 0.174 | benign | 해석 → | |
| E404Q | Uncertain significance | 0.122 | benign | 해석 → | |
| E693G | Uncertain significance | 0.327 | benign | 해석 → | |
| E849G | Uncertain significance | 0.143 | benign | 해석 → | |
| E879G | Uncertain significance | 0.691 | pathogenic | 해석 → | |
| E879K | Uncertain significance | 0.537 | ambiguous | 해석 → | |
| F1104L | Uncertain significance | 0.982 | pathogenic | 해석 → | |
| F1190S | Uncertain significance | 0.092 | benign | 해석 → | |
| F1243L | Uncertain significance | 0.920 | pathogenic | 해석 → | |
| F1302L | Uncertain significance | 0.996 | pathogenic | 해석 → | |
| F1390S | Uncertain significance | 0.082 | benign | 해석 → | |
| F2059L | Uncertain significance | 0.949 | pathogenic | 해석 → | |
| F2102L | Uncertain significance | 0.946 | pathogenic | 해석 → | |
| F2288L | Uncertain significance | 0.802 | pathogenic | 해석 → | |
| F2413V | Uncertain significance | 0.284 | benign | 해석 → | |
| F2518L | Benign/Likely benign | 0.940 | pathogenic | ⚠ | 해석 → |
| F2529L | Uncertain significance | 0.757 | pathogenic | 해석 → | |
| F2602* | Uncertain significance | — | 미적재 | 해석 → | |
| F2682S | Uncertain significance | 0.429 | ambiguous | 해석 → | |
| F2700S | Uncertain significance | 0.151 | benign | 해석 → | |
| F2744L | Uncertain significance | 0.427 | ambiguous | 해석 → | |
| F931I | Uncertain significance | 0.777 | pathogenic | 해석 → | |
| G1122A | Uncertain significance | 0.289 | benign | 해석 → | |
| G124D | Uncertain significance | 0.103 | benign | 해석 → | |
| G124S | Uncertain significance | 0.112 | benign | 해석 → | |
| G1269S | Uncertain significance | 0.077 | benign | 해석 → | |
| G129R | Uncertain significance | 0.161 | benign | 해석 → | |
| G1346S | Uncertain significance | 0.315 | benign | 해석 → | |
| G1384S | Uncertain significance | 0.267 | benign | 해석 → | |
| G138V | Uncertain significance | 0.086 | benign | 해석 → | |
| G1415R | Likely benign | 0.271 | benign | ✓ | 해석 → |
| G1424S | Uncertain significance | 0.234 | benign | 해석 → | |
| G1425S | Uncertain significance | 0.371 | ambiguous | 해석 → | |
| G1433S | Uncertain significance | 0.107 | benign | 해석 → | |
| G1477D | Uncertain significance | 0.916 | pathogenic | 해석 → | |
| G1477S | Uncertain significance | 0.147 | benign | 해석 → | |
| G1483C | Uncertain significance | 0.994 | pathogenic | 해석 → | |
| G1483S | Uncertain significance | 0.937 | pathogenic | 해석 → | |
| G1525R | Uncertain significance | 0.633 | pathogenic | 해석 → | |
| G1551R | Uncertain significance | 0.098 | benign | 해석 → | |
| G1587S | Uncertain significance | 0.124 | benign | 해석 → | |
| G1628S | Uncertain significance | 0.084 | benign | 해석 → | |
| G1635E | Uncertain significance | 0.119 | benign | 해석 → | |
| G1635R | Uncertain significance | 0.121 | benign | 해석 → | |
| G1655A | Uncertain significance | 0.099 | benign | 해석 → |
AM 임계: 병원성 ≥ 0.564, 양성 < 0.34 (AlphaMissense 권장 컷오프, Cheng et al. Science 2023)
📚 데이터: NCBI ClinVar variant_summary (GRCh38, 최근 다운로드) + 우리 유전자 서브셋만 추출.