ClinVar 임상 비교
AlphaMissense AI 예측 vs ClinVar 실제 임상 분류 — 일치/불일치 분석
ClinVar 변이 (서브셋)
319,822
우리 보유 유전자만
커버 유전자
308
병원성/가능 변이
56,770
AM과 교차 가능
154,518
단백질 변이 추출
MTM1: AM vs ClinVar 일치도
406 변이✓ 둘 다 병원성
63
✓ 둘 다 양성
18
⚠ CV=병원성 / AM=양성
0
⚠ CV=양성 / AM=병원성
1
— AM 미적재
324
AM ↔ ClinVar 비교 가능 변이 82건 중 81건 일치 / 1건 불일치 — 일치도 98.8%
변이별 비교
Max 500| 변이 | ClinVar 분류 | AM 점수 | AM 분류 | 일치 | |
|---|---|---|---|---|---|
| A279G | Likely pathogenic | 0.779 | pathogenic | ✓ | 해석 → |
| A287D | Likely pathogenic | 1.000 | pathogenic | ✓ | 해석 → |
| C113* | Pathogenic | — | 미적재 | 해석 → | |
| D210G | Conflicting classifications of pathogeni | 0.461 | ambiguous | 해석 → | |
| D380H | Likely pathogenic | 1.000 | pathogenic | ✓ | 해석 → |
| D380V | Pathogenic | 1.000 | pathogenic | ✓ | 해석 → |
| D394H | Likely pathogenic | 0.990 | pathogenic | ✓ | 해석 → |
| D431N | Uncertain significance | 0.436 | ambiguous | 해석 → | |
| D443A | Likely pathogenic | 0.996 | pathogenic | ✓ | 해석 → |
| E104* | Pathogenic | — | 미적재 | 해석 → | |
| E135* | Pathogenic | — | 미적재 | 해석 → | |
| E135* | Pathogenic | — | 미적재 | 해석 → | |
| E157K | Likely pathogenic | 0.751 | pathogenic | ✓ | 해석 → |
| E17* | Pathogenic | — | 미적재 | 해석 → | |
| E172* | Pathogenic | — | 미적재 | 해석 → | |
| E33* | Likely pathogenic | — | 미적재 | 해석 → | |
| E33* | Pathogenic | — | 미적재 | 해석 → | |
| E401* | Likely pathogenic | — | 미적재 | 해석 → | |
| E404D | Likely pathogenic | 0.985 | pathogenic | ✓ | 해석 → |
| E404K | Pathogenic | 0.666 | pathogenic | ✓ | 해석 → |
| E410* | Pathogenic | — | 미적재 | 해석 → | |
| E460* | Pathogenic | — | 미적재 | 해석 → | |
| E48* | Pathogenic | — | 미적재 | 해석 → | |
| E483* | Pathogenic | — | 미적재 | 해석 → | |
| E487* | Pathogenic | — | 미적재 | 해석 → | |
| E566* | Likely pathogenic | — | 미적재 | 해석 → | |
| E76* | Pathogenic | — | 미적재 | 해석 → | |
| F456S | Conflicting classifications of pathogeni | 0.996 | pathogenic | 해석 → | |
| F458V | Likely pathogenic | 0.986 | pathogenic | ✓ | 해석 → |
| F478S | Pathogenic | 0.994 | pathogenic | ✓ | 해석 → |
| G163* | Likely pathogenic | — | 미적재 | 해석 → | |
| G248V | Likely pathogenic | 0.989 | pathogenic | ✓ | 해석 → |
| G294* | Pathogenic | — | 미적재 | 해석 → | |
| G378* | Likely pathogenic | — | 미적재 | 해석 → | |
| G378R | Pathogenic/Likely pathogenic | 1.000 | pathogenic | ✓ | 해석 → |
| G378V | Likely pathogenic | 1.000 | pathogenic | ✓ | 해석 → |
| G402A | Pathogenic | 0.947 | pathogenic | ✓ | 해석 → |
| G402R | Likely pathogenic | 0.998 | pathogenic | ✓ | 해석 → |
| G402V | Pathogenic | 0.993 | pathogenic | ✓ | 해석 → |
| G415E | Pathogenic/Likely pathogenic | 0.999 | pathogenic | ✓ | 해석 → |
| G476V | Pathogenic | 0.994 | pathogenic | ✓ | 해석 → |
| H374D | Pathogenic | 0.999 | pathogenic | ✓ | 해석 → |
| H469D | Conflicting classifications of pathogeni | 0.789 | pathogenic | 해석 → | |
| H469R | Conflicting classifications of pathogeni | 0.853 | pathogenic | 해석 → | |
| I264S | Pathogenic | 0.959 | pathogenic | ✓ | 해석 → |
| I412V | Conflicting classifications of pathogeni | 0.095 | benign | 해석 → | |
| I442N | Likely pathogenic | 0.961 | pathogenic | ✓ | 해석 → |
| I502K | Pathogenic/Likely pathogenic | 0.967 | pathogenic | ✓ | 해석 → |
| K114* | Pathogenic | — | 미적재 | 해석 → | |
| K255* | Likely pathogenic | — | 미적재 | 해석 → | |
| K269* | Likely pathogenic | — | 미적재 | 해석 → | |
| K325* | Likely pathogenic | — | 미적재 | 해석 → | |
| K516* | Pathogenic | — | 미적재 | 해석 → | |
| L109P | Likely pathogenic | 0.998 | pathogenic | ✓ | 해석 → |
| L178S | Conflicting classifications of pathogeni | 0.961 | pathogenic | 해석 → | |
| L194P | Likely pathogenic | 0.956 | pathogenic | ✓ | 해석 → |
| L213F | Conflicting classifications of pathogeni | 0.864 | pathogenic | 해석 → | |
| L228P | Pathogenic | 0.967 | pathogenic | ✓ | 해석 → |
| L341* | Likely pathogenic | — | 미적재 | 해석 → | |
| L347* | Pathogenic | — | 미적재 | 해석 → | |
| L372P | Likely pathogenic | 0.992 | pathogenic | ✓ | 해석 → |
| L463S | Likely pathogenic | 0.991 | pathogenic | ✓ | 해석 → |
| L463W | Likely pathogenic | 0.984 | pathogenic | ✓ | 해석 → |
| L70F | Pathogenic | 0.449 | ambiguous | 해석 → | |
| L87P | Pathogenic | 0.994 | pathogenic | ✓ | 해석 → |
| M1I | Pathogenic | 0.729 | pathogenic | ✓ | 해석 → |
| M1R | Pathogenic | 0.770 | pathogenic | ✓ | 해석 → |
| M1T | Pathogenic | 0.785 | pathogenic | ✓ | 해석 → |
| N189S | Pathogenic/Likely pathogenic | 0.693 | pathogenic | ✓ | 해석 → |
| N459I | Pathogenic | 0.983 | pathogenic | ✓ | 해석 → |
| P179S | Pathogenic | 0.773 | pathogenic | ✓ | 해석 → |
| P205L | Pathogenic | 0.981 | pathogenic | ✓ | 해석 → |
| P226T | Likely pathogenic | 0.948 | pathogenic | ✓ | 해석 → |
| P436L | Likely pathogenic | 0.992 | pathogenic | ✓ | 해석 → |
| Q244* | Pathogenic | — | 미적재 | 해석 → | |
| Q461* | Pathogenic | — | 미적재 | 해석 → | |
| R130* | Likely pathogenic | — | 미적재 | 해석 → | |
| R184* | Likely pathogenic | — | 미적재 | 해석 → | |
| R184G | Pathogenic | 0.918 | pathogenic | ✓ | 해석 → |
| R222* | Pathogenic | — | 미적재 | 해석 → | |
| R224* | Pathogenic | — | 미적재 | 해석 → | |
| R24* | Pathogenic | — | 미적재 | 해석 → | |
| R241C | Pathogenic | 0.971 | pathogenic | ✓ | 해석 → |
| R253* | Pathogenic | — | 미적재 | 해석 → | |
| R280* | Likely pathogenic | — | 미적재 | 해석 → | |
| R29* | Pathogenic | — | 미적재 | 해석 → | |
| R37* | Pathogenic | — | 미적재 | 해석 → | |
| R421* | Pathogenic | — | 미적재 | 해석 → | |
| R421L | Pathogenic/Likely pathogenic | 0.995 | pathogenic | ✓ | 해석 → |
| R421Q | Pathogenic/Likely pathogenic | 0.990 | pathogenic | ✓ | 해석 → |
| R474* | Pathogenic | — | 미적재 | 해석 → | |
| R486* | Pathogenic | — | 미적재 | 해석 → | |
| R520* | Pathogenic | — | 미적재 | 해석 → | |
| R69C | Pathogenic | 0.573 | pathogenic | ✓ | 해석 → |
| R69G | Pathogenic | 0.953 | pathogenic | ✓ | 해석 → |
| S101G | Conflicting classifications of pathogeni | 0.684 | pathogenic | 해석 → | |
| S243N | Likely pathogenic | 0.996 | pathogenic | ✓ | 해석 → |
| S320P | Pathogenic | 0.999 | pathogenic | ✓ | 해석 → |
| S370* | Pathogenic | — | 미적재 | 해석 → | |
| S387Y | Pathogenic | 0.996 | pathogenic | ✓ | 해석 → |
| S593* | Likely pathogenic | — | 미적재 | 해석 → | |
| T186I | Pathogenic/Likely pathogenic | 0.843 | pathogenic | ✓ | 해석 → |
| T197I | Pathogenic | 0.989 | pathogenic | ✓ | 해석 → |
| T66I | Pathogenic | 0.996 | pathogenic | ✓ | 해석 → |
| V204G | Pathogenic | 0.895 | pathogenic | ✓ | 해석 → |
| V227M | Pathogenic/Likely pathogenic | 0.759 | pathogenic | ✓ | 해석 → |
| V49F | Pathogenic | 0.684 | pathogenic | ✓ | 해석 → |
| V49I | Conflicting classifications of pathogeni | 0.119 | benign | 해석 → | |
| W164* | Likely pathogenic | — | 미적재 | 해석 → | |
| W183* | Pathogenic | — | 미적재 | 해석 → | |
| W183* | Pathogenic | — | 미적재 | 해석 → | |
| W230C | Likely pathogenic | 0.995 | pathogenic | ✓ | 해석 → |
| W230C | Likely pathogenic | 0.995 | pathogenic | ✓ | 해석 → |
| W230R | Likely pathogenic | 0.999 | pathogenic | ✓ | 해석 → |
| W337* | Likely pathogenic | — | 미적재 | 해석 → | |
| W346* | Likely pathogenic | — | 미적재 | 해석 → | |
| W346R | Likely pathogenic | 1.000 | pathogenic | ✓ | 해석 → |
| W379* | Pathogenic | — | 미적재 | 해석 → | |
| W379* | Pathogenic | — | 미적재 | 해석 → | |
| W411* | Pathogenic | — | 미적재 | 해석 → | |
| W411C | Likely pathogenic | 0.998 | pathogenic | ✓ | 해석 → |
| W446* | Pathogenic | — | 미적재 | 해석 → | |
| W446* | Pathogenic | — | 미적재 | 해석 → | |
| W499R | Conflicting classifications of pathogeni | 0.999 | pathogenic | 해석 → | |
| W534* | Likely pathogenic | — | 미적재 | 해석 → | |
| W534S | Likely pathogenic | 0.999 | pathogenic | ✓ | 해석 → |
| Y140* | Pathogenic | — | 미적재 | 해석 → | |
| Y140* | Pathogenic | — | 미적재 | 해석 → | |
| Y192C | Likely pathogenic | 0.352 | ambiguous | 해석 → | |
| Y198* | Pathogenic | — | 미적재 | 해석 → | |
| Y198H | Likely pathogenic | 0.995 | pathogenic | ✓ | 해석 → |
| Y198S | Pathogenic | 0.958 | pathogenic | ✓ | 해석 → |
| Y260S | Pathogenic | 0.973 | pathogenic | ✓ | 해석 → |
| Y397* | Pathogenic | — | 미적재 | 해석 → | |
| Y397C | Pathogenic | 0.563 | ambiguous | 해석 → | |
| Y51* | Pathogenic | — | 미적재 | 해석 → | |
| Y537* | Pathogenic | — | 미적재 | 해석 → | |
| Y9* | Pathogenic | — | 미적재 | 해석 → | |
| A122S | Uncertain significance | 0.433 | ambiguous | 해석 → | |
| A141P | Uncertain significance | 0.992 | pathogenic | 해석 → | |
| A141V | Conflicting classifications of pathogeni | 0.477 | ambiguous | 해석 → | |
| A2T | Uncertain significance | 0.382 | ambiguous | 해석 → | |
| A2V | Uncertain significance | 0.612 | pathogenic | 해석 → | |
| A300T | Uncertain significance | 0.100 | benign | 해석 → | |
| A304T | Uncertain significance | 0.132 | benign | 해석 → | |
| A304V | Uncertain significance | 0.197 | benign | 해석 → | |
| A357P | Uncertain significance | 0.999 | pathogenic | 해석 → | |
| A485V | Benign | 0.076 | benign | ✓ | 해석 → |
| A577S | Uncertain significance | 0.074 | benign | 해석 → | |
| A577T | Conflicting classifications of pathogeni | 0.069 | benign | 해석 → | |
| A99T | Uncertain significance | 0.234 | benign | 해석 → | |
| A99V | Benign | 0.271 | benign | ✓ | 해석 → |
| C191S | Uncertain significance | 0.074 | benign | 해석 → | |
| C195F | Uncertain significance | 0.983 | pathogenic | 해석 → | |
| C482R | Uncertain significance | 0.937 | pathogenic | 해석 → | |
| D162I | Uncertain significance | 0.436 | ambiguous | 해석 → | |
| D210V | Uncertain significance | 0.412 | ambiguous | 해석 → | |
| D211Y | Uncertain significance | 0.249 | benign | 해석 → | |
| D257G | Uncertain significance | 0.996 | pathogenic | 해석 → | |
| D25G | Uncertain significance | 0.094 | benign | 해석 → | |
| D262A | Uncertain significance | 0.206 | benign | 해석 → | |
| D262N | Likely benign | 0.120 | benign | ✓ | 해석 → |
| D362H | Uncertain significance | 0.779 | pathogenic | 해석 → | |
| D394G | Uncertain significance | 0.981 | pathogenic | 해석 → | |
| D433N | Uncertain significance | 0.592 | pathogenic | 해석 → | |
| D468G | Uncertain significance | 0.932 | pathogenic | 해석 → | |
| D565N | Uncertain significance | 0.099 | benign | 해석 → | |
| D78H | Uncertain significance | 0.264 | benign | 해석 → | |
| D78V | Uncertain significance | 0.199 | benign | 해석 → | |
| E156K | Likely benign | 0.087 | benign | ✓ | 해석 → |
| E157Q | Uncertain significance | 0.439 | ambiguous | 해석 → | |
| E234D | Uncertain significance | 0.119 | benign | 해석 → | |
| E234Q | Conflicting classifications of pathogeni | 0.133 | benign | 해석 → | |
| E305K | Benign | 0.364 | ambiguous | 해석 → | |
| E305Q | Uncertain significance | 0.208 | benign | 해석 → | |
| E410Q | Uncertain significance | 0.983 | pathogenic | 해석 → | |
| E41G | Uncertain significance | 0.984 | pathogenic | 해석 → | |
| E457K | Uncertain significance | 0.854 | pathogenic | 해석 → | |
| E532D | Uncertain significance | 0.501 | ambiguous | 해석 → | |
| E566G | Uncertain significance | 0.163 | benign | 해석 → | |
| E566K | Uncertain significance | 0.153 | benign | 해석 → | |
| F159L | Uncertain significance | 0.943 | pathogenic | 해석 → | |
| F187S | Uncertain significance | 0.275 | benign | 해석 → | |
| F475L | Uncertain significance | 0.996 | pathogenic | 해석 → | |
| F480L | Uncertain significance | 0.741 | pathogenic | 해석 → | |
| F509L | Uncertain significance | 0.928 | pathogenic | 해석 → | |
| G127D | Uncertain significance | 0.848 | pathogenic | 해석 → | |
| G177V | Uncertain significance | 0.610 | pathogenic | 해석 → | |
| G248S | Conflicting classifications of pathogeni | 0.895 | pathogenic | 해석 → | |
| H181Q | Uncertain significance | 0.076 | benign | 해석 → | |
| H182Y | Uncertain significance | 0.076 | benign | 해석 → | |
| H302R | Uncertain significance | 0.067 | benign | 해석 → | |
| H312R | Uncertain significance | 0.630 | pathogenic | 해석 → | |
| H315R | Uncertain significance | 0.998 | pathogenic | 해석 → | |
| H416Q | Uncertain significance | 0.993 | pathogenic | 해석 → | |
| H469N | Uncertain significance | 0.215 | benign | 해석 → | |
| H469P | Uncertain significance | 0.987 | pathogenic | 해석 → | |
| H598R | Conflicting classifications of pathogeni | 0.082 | benign | 해석 → | |
| I185L | Uncertain significance | 0.117 | benign | 해석 → | |
| I188L | Uncertain significance | 0.084 | benign | 해석 → |
AM 임계: 병원성 ≥ 0.564, 양성 < 0.34 (AlphaMissense 권장 컷오프, Cheng et al. Science 2023)
📚 데이터: NCBI ClinVar variant_summary (GRCh38, 최근 다운로드) + 우리 유전자 서브셋만 추출.