ClinVar 임상 비교
AlphaMissense AI 예측 vs ClinVar 실제 임상 분류 — 일치/불일치 분석
ClinVar 변이 (서브셋)
319,822
우리 보유 유전자만
커버 유전자
308
병원성/가능 변이
56,770
AM과 교차 가능
154,518
단백질 변이 추출
OAT: AM vs ClinVar 일치도
269 변이✓ 둘 다 병원성
36
✓ 둘 다 양성
5
⚠ CV=병원성 / AM=양성
3
⚠ CV=양성 / AM=병원성
0
— AM 미적재
225
AM ↔ ClinVar 비교 가능 변이 44건 중 41건 일치 / 3건 불일치 — 일치도 93.2%
변이별 비교
Max 500| 변이 | ClinVar 분류 | AM 점수 | AM 분류 | 일치 | |
|---|---|---|---|---|---|
| A184T | Pathogenic | 0.570 | pathogenic | ✓ | 해석 → |
| A226V | Pathogenic/Likely pathogenic | 0.785 | pathogenic | ✓ | 해석 → |
| A270P | Pathogenic | 0.926 | pathogenic | ✓ | 해석 → |
| C150* | Likely pathogenic | — | 미적재 | 해석 → | |
| C253* | Likely pathogenic | — | 미적재 | 해석 → | |
| C394R | Uncertain significance | 0.988 | pathogenic | 해석 → | |
| C394Y | Pathogenic/Likely pathogenic | 0.993 | pathogenic | ✓ | 해석 → |
| C93F | Likely pathogenic | 0.641 | pathogenic | ✓ | 해석 → |
| D195Y | Conflicting classifications of pathogeni | 0.140 | benign | 해석 → | |
| E318K | Pathogenic/Likely pathogenic | 0.715 | pathogenic | ✓ | 해석 → |
| E384* | Pathogenic | — | 미적재 | 해석 → | |
| E422* | Likely pathogenic | — | 미적재 | 해석 → | |
| G121D | Likely pathogenic | 0.936 | pathogenic | ✓ | 해석 → |
| G142E | Likely pathogenic | 0.992 | pathogenic | ✓ | 해석 → |
| G17* | Likely pathogenic | — | 미적재 | 해석 → | |
| G237D | Likely pathogenic | 0.978 | pathogenic | ✓ | 해석 → |
| G248* | Pathogenic/Likely pathogenic | — | 미적재 | 해석 → | |
| G297C | Likely pathogenic | 0.900 | pathogenic | ✓ | 해석 → |
| G353D | Pathogenic/Likely pathogenic | 0.980 | pathogenic | ✓ | 해석 → |
| G373E | Uncertain significance | 0.987 | pathogenic | 해석 → | |
| G375A | Likely pathogenic | 0.943 | pathogenic | ✓ | 해석 → |
| G401* | Pathogenic | — | 미적재 | 해석 → | |
| G51D | Pathogenic/Likely pathogenic | 0.969 | pathogenic | ✓ | 해석 → |
| G91E | Conflicting classifications of pathogeni | 0.990 | pathogenic | 해석 → | |
| H319Y | Pathogenic | 0.875 | pathogenic | ✓ | 해석 → |
| I412T | Likely pathogenic | 0.987 | pathogenic | ✓ | 해석 → |
| I436N | Pathogenic/Likely pathogenic | 0.950 | pathogenic | ✓ | 해석 → |
| K292R | Likely pathogenic | 0.734 | pathogenic | ✓ | 해석 → |
| L294H | Pathogenic | 0.986 | pathogenic | ✓ | 해석 → |
| L402P | Pathogenic | 0.995 | pathogenic | ✓ | 해석 → |
| L437F | Conflicting classifications of pathogeni | 0.102 | benign | 해석 → | |
| M139R | Conflicting classifications of pathogeni | 0.942 | pathogenic | 해석 → | |
| M1I | Pathogenic | 0.179 | benign | ⚠ | 해석 → |
| M1T | Likely pathogenic | 0.210 | benign | ⚠ | 해석 → |
| M1V | Pathogenic | 0.061 | benign | ⚠ | 해석 → |
| N326K | Likely pathogenic | 0.988 | pathogenic | ✓ | 해석 → |
| N54K | Conflicting classifications of pathogeni | 0.992 | pathogenic | 해석 → | |
| N89K | Likely pathogenic | 0.981 | pathogenic | ✓ | 해석 → |
| P199Q | Pathogenic/Likely pathogenic | 0.933 | pathogenic | ✓ | 해석 → |
| P241L | Pathogenic/Likely pathogenic | 0.800 | pathogenic | ✓ | 해석 → |
| P300L | Pathogenic | 0.873 | pathogenic | ✓ | 해석 → |
| P327R | Likely pathogenic | 0.974 | pathogenic | ✓ | 해석 → |
| P417L | Pathogenic/Likely pathogenic | 0.886 | pathogenic | ✓ | 해석 → |
| P417S | Conflicting classifications of pathogeni | 0.598 | pathogenic | 해석 → | |
| Q104R | Likely pathogenic | 0.801 | pathogenic | ✓ | 해석 → |
| Q233* | Pathogenic | — | 미적재 | 해석 → | |
| Q233R | Conflicting classifications of pathogeni | 0.876 | pathogenic | 해석 → | |
| Q266* | Pathogenic/Likely pathogenic | — | 미적재 | 해석 → | |
| Q90E | Uncertain significance | 0.431 | ambiguous | 해석 → | |
| R154H | Conflicting classifications of pathogeni | 0.803 | pathogenic | 해석 → | |
| R154L | Likely pathogenic | 0.899 | pathogenic | ✓ | 해석 → |
| R180T | Pathogenic/Likely pathogenic | 0.995 | pathogenic | ✓ | 해석 → |
| R250* | Pathogenic | — | 미적재 | 해석 → | |
| R250P | Pathogenic | 0.973 | pathogenic | ✓ | 해석 → |
| R271K | Pathogenic/Likely pathogenic | 0.890 | pathogenic | ✓ | 해석 → |
| R331* | Pathogenic | — | 미적재 | 해석 → | |
| R396* | Pathogenic/Likely pathogenic | — | 미적재 | 해석 → | |
| R398* | Pathogenic | — | 미적재 | 해석 → | |
| R426* | Pathogenic | — | 미적재 | 해석 → | |
| T181M | Pathogenic | 0.830 | pathogenic | ✓ | 해석 → |
| T267I | Pathogenic/Likely pathogenic | 0.908 | pathogenic | ✓ | 해석 → |
| V332M | Pathogenic/Likely pathogenic | 0.427 | ambiguous | 해석 → | |
| W156* | Pathogenic | — | 미적재 | 해석 → | |
| W178* | Pathogenic | — | 미적재 | 해석 → | |
| W178* | Pathogenic/Likely pathogenic | — | 미적재 | 해석 → | |
| W275* | Pathogenic/Likely pathogenic | — | 미적재 | 해석 → | |
| W388* | Pathogenic | — | 미적재 | 해석 → | |
| W388* | Pathogenic/Likely pathogenic | — | 미적재 | 해석 → | |
| W391* | Pathogenic/Likely pathogenic | — | 미적재 | 해석 → | |
| Y158S | Likely pathogenic | 0.685 | pathogenic | ✓ | 해석 → |
| Y166* | Pathogenic | — | 미적재 | 해석 → | |
| Y194* | Likely pathogenic | — | 미적재 | 해석 → | |
| Y194* | Likely pathogenic | — | 미적재 | 해석 → | |
| Y209* | Likely pathogenic | — | 미적재 | 해석 → | |
| Y209* | Pathogenic | — | 미적재 | 해석 → | |
| Y245C | Pathogenic | 0.783 | pathogenic | ✓ | 해석 → |
| Y299* | Pathogenic/Likely pathogenic | — | 미적재 | 해석 → | |
| Y299* | Pathogenic/Likely pathogenic | — | 미적재 | 해석 → | |
| Y323* | Likely pathogenic | — | 미적재 | 해석 → | |
| Y323* | Likely pathogenic | — | 미적재 | 해석 → | |
| Y55H | Pathogenic | 0.991 | pathogenic | ✓ | 해석 → |
| Y78* | Likely pathogenic | — | 미적재 | 해석 → | |
| *440W | Uncertain significance | — | 미적재 | 해석 → | |
| A12S | Uncertain significance | 0.078 | benign | 해석 → | |
| A173T | Uncertain significance | 0.204 | benign | 해석 → | |
| A214S | Uncertain significance | 0.098 | benign | 해석 → | |
| A226T | Uncertain significance | 0.684 | pathogenic | 해석 → | |
| A262D | Uncertain significance | 0.949 | pathogenic | 해석 → | |
| A270V | Uncertain significance | 0.617 | pathogenic | 해석 → | |
| A333T | Uncertain significance | 0.485 | ambiguous | 해석 → | |
| A335S | Uncertain significance | 0.118 | benign | 해석 → | |
| A346T | Uncertain significance | 0.120 | benign | 해석 → | |
| A349E | Uncertain significance | 0.970 | pathogenic | 해석 → | |
| A349P | Uncertain significance | 0.990 | pathogenic | 해석 → | |
| A379T | Uncertain significance | 0.857 | pathogenic | 해석 → | |
| A415V | Uncertain significance | 0.614 | pathogenic | 해석 → | |
| A61S | Uncertain significance | 0.261 | benign | 해석 → | |
| C253G | Uncertain significance | 0.732 | pathogenic | 해석 → | |
| D195N | Uncertain significance | 0.084 | benign | 해석 → | |
| D205A | Uncertain significance | 0.124 | benign | 해석 → | |
| D205G | Uncertain significance | 0.159 | benign | 해석 → | |
| D205N | Uncertain significance | 0.093 | benign | 해석 → | |
| D205T | Uncertain significance | 0.118 | benign | 해석 → | |
| D211E | Uncertain significance | 0.485 | ambiguous | 해석 → | |
| D263V | Uncertain significance | 0.993 | pathogenic | 해석 → | |
| D308N | Uncertain significance | 0.104 | benign | 해석 → | |
| D387G | Uncertain significance | 0.097 | benign | 해석 → | |
| D387H | Uncertain significance | 0.176 | benign | 해석 → | |
| D389G | Uncertain significance | 0.331 | benign | 해석 → | |
| D389Y | Uncertain significance | 0.429 | ambiguous | 해석 → | |
| D410N | Uncertain significance | 0.117 | benign | 해석 → | |
| D41E | Likely benign | 0.065 | benign | ✓ | 해석 → |
| D42N | Uncertain significance | 0.078 | benign | 해석 → | |
| D80E | Uncertain significance | 0.988 | pathogenic | 해석 → | |
| E122K | Uncertain significance | 0.103 | benign | 해석 → | |
| E264D | Uncertain significance | 0.948 | pathogenic | 해석 → | |
| E342K | Uncertain significance | 0.105 | benign | 해석 → | |
| E343Q | Uncertain significance | 0.350 | ambiguous | 해석 → | |
| E347K | Uncertain significance | 0.065 | benign | 해석 → | |
| E359G | Uncertain significance | 0.166 | benign | 해석 → | |
| E359V | Uncertain significance | 0.450 | ambiguous | 해석 → | |
| E422K | Uncertain significance | 0.126 | benign | 해석 → | |
| E424D | Uncertain significance | 0.307 | benign | 해석 → | |
| E427K | Uncertain significance | 0.126 | benign | 해석 → | |
| E63G | Uncertain significance | 0.227 | benign | 해석 → | |
| F131L | Uncertain significance | 0.817 | pathogenic | 해석 → | |
| F172S | Uncertain significance | 0.921 | pathogenic | 해석 → | |
| F2L | Uncertain significance | 0.279 | benign | 해석 → | |
| G146V | Uncertain significance | 0.444 | ambiguous | 해석 → | |
| G157S | Uncertain significance | 0.199 | benign | 해석 → | |
| G17R | Uncertain significance | 0.135 | benign | 해석 → | |
| G17R | Uncertain significance | 0.135 | benign | 해석 → | |
| G296R | Uncertain significance | 0.967 | pathogenic | 해석 → | |
| G324S | Uncertain significance | 0.775 | pathogenic | 해석 → | |
| G329A | Uncertain significance | 0.084 | benign | 해석 → | |
| G36A | Conflicting classifications of pathogeni | 0.084 | benign | 해석 → | |
| H134R | Uncertain significance | 0.077 | benign | 해석 → | |
| H319R | Uncertain significance | 0.975 | pathogenic | 해석 → | |
| H408D | Uncertain significance | 0.912 | pathogenic | 해석 → | |
| H53Q | Uncertain significance | 0.642 | pathogenic | 해석 → | |
| H53R | Uncertain significance | 0.316 | benign | 해석 → | |
| H56Y | Uncertain significance | 0.314 | benign | 해석 → | |
| H94Y | Uncertain significance | 0.630 | pathogenic | 해석 → | |
| I207F | Uncertain significance | 0.460 | ambiguous | 해석 → | |
| I207V | Uncertain significance | 0.084 | benign | 해석 → | |
| I287T | Uncertain significance | 0.423 | ambiguous | 해석 → | |
| I380V | Likely benign | 0.057 | benign | ✓ | 해석 → |
| I411V | Uncertain significance | 0.110 | benign | 해석 → | |
| I429T | Uncertain significance | 0.080 | benign | 해석 → | |
| I429V | Uncertain significance | 0.052 | benign | 해석 → | |
| I431V | Uncertain significance | 0.160 | benign | 해석 → | |
| I432F | Uncertain significance | 0.455 | ambiguous | 해석 → | |
| I43S | Uncertain significance | 0.696 | pathogenic | 해석 → | |
| I68V | Uncertain significance | 0.069 | benign | 해석 → | |
| K135N | Uncertain significance | 0.948 | pathogenic | 해석 → | |
| K135R | Uncertain significance | 0.090 | benign | 해석 → | |
| K161N | Uncertain significance | 0.922 | pathogenic | 해석 → | |
| K165T | Uncertain significance | 0.156 | benign | 해석 → | |
| K167R | Uncertain significance | 0.078 | benign | 해석 → | |
| K167T | Uncertain significance | 0.151 | benign | 해석 → | |
| K32N | Uncertain significance | 0.161 | benign | 해석 → | |
| K351N | Uncertain significance | 0.169 | benign | 해석 → | |
| K362E | Uncertain significance | 0.130 | benign | 해석 → | |
| K421E | Uncertain significance | 0.102 | benign | 해석 → | |
| K434E | Uncertain significance | 0.109 | benign | 해석 → | |
| K434T | Uncertain significance | 0.149 | benign | 해석 → | |
| L182F | Uncertain significance | 0.356 | ambiguous | 해석 → | |
| L215P | Uncertain significance | 0.980 | pathogenic | 해석 → | |
| L259V | Uncertain significance | 0.276 | benign | 해석 → | |
| L289F | Uncertain significance | 0.620 | pathogenic | 해석 → | |
| L312M | Uncertain significance | 0.109 | benign | 해석 → | |
| L328V | Uncertain significance | 0.078 | benign | 해석 → | |
| L352F | Uncertain significance | 0.277 | benign | 해석 → | |
| L352S | Uncertain significance | 0.291 | benign | 해석 → | |
| L356F | Uncertain significance | 0.079 | benign | 해석 → | |
| L395R | Uncertain significance | 0.340 | benign | 해석 → | |
| L403P | Uncertain significance | 0.991 | pathogenic | 해석 → | |
| L437F | Benign | 0.102 | benign | ✓ | 해석 → |
| L62P | Uncertain significance | 0.875 | pathogenic | 해석 → | |
| L82R | Uncertain significance | 0.973 | pathogenic | 해석 → | |
| M201I | Uncertain significance | 0.497 | ambiguous | 해석 → | |
| M247T | Uncertain significance | 0.055 | benign | 해석 → | |
| N117D | Uncertain significance | 0.660 | pathogenic | 해석 → | |
| N118D | Likely benign | 0.053 | benign | ✓ | 해석 → |
| N118Y | Uncertain significance | 0.242 | benign | 해석 → | |
| N132S | Uncertain significance | 0.066 | benign | 해석 → | |
| N282H | Uncertain significance | 0.089 | benign | 해석 → | |
| N282S | Uncertain significance | 0.082 | benign | 해석 → | |
| N326S | Uncertain significance | 0.149 | benign | 해석 → | |
| N358S | Uncertain significance | 0.063 | benign | 해석 → | |
| N400Y | Uncertain significance | 0.138 | benign | 해석 → | |
| N89S | Uncertain significance | 0.057 | benign | 해석 → | |
| N99S | Uncertain significance | 0.057 | benign | 해석 → | |
| P138L | Uncertain significance | 0.457 | ambiguous | 해석 → | |
| P202L | Uncertain significance | 0.228 | benign | 해석 → | |
| P202S | Uncertain significance | 0.212 | benign | 해석 → | |
| P202T | Uncertain significance | 0.204 | benign | 해석 → | |
| P241R | Uncertain significance | 0.964 | pathogenic | 해석 → | |
| P285S | Uncertain significance | 0.843 | pathogenic | 해석 → | |
| P300R | Uncertain significance | 0.980 | pathogenic | 해석 → |
AM 임계: 병원성 ≥ 0.564, 양성 < 0.34 (AlphaMissense 권장 컷오프, Cheng et al. Science 2023)
📚 데이터: NCBI ClinVar variant_summary (GRCh38, 최근 다운로드) + 우리 유전자 서브셋만 추출.