ClinVar 임상 비교
AlphaMissense AI 예측 vs ClinVar 실제 임상 분류 — 일치/불일치 분석
ClinVar 변이 (서브셋)
319,822
우리 보유 유전자만
커버 유전자
308
병원성/가능 변이
56,770
AM과 교차 가능
154,518
단백질 변이 추출
PPARGC1A: AM vs ClinVar 일치도
118 변이✓ 둘 다 병원성
0
✓ 둘 다 양성
7
⚠ CV=병원성 / AM=양성
0
⚠ CV=양성 / AM=병원성
0
— AM 미적재
111
AM ↔ ClinVar 비교 가능 변이 7건 중 7건 일치 / 0건 불일치 — 일치도 100%
변이별 비교
Max 500| 변이 | ClinVar 분류 | AM 점수 | AM 분류 | 일치 | |
|---|---|---|---|---|---|
| A478T | Uncertain significance | 0.073 | benign | 해석 → | |
| A662V | Uncertain significance | 0.249 | benign | 해석 → | |
| A792D | Uncertain significance | 0.998 | pathogenic | 해석 → | |
| C547R | Uncertain significance | 0.237 | benign | 해석 → | |
| D218N | Uncertain significance | 0.088 | benign | 해석 → | |
| D234E | Uncertain significance | 0.104 | benign | 해석 → | |
| D414G | Uncertain significance | 0.079 | benign | 해석 → | |
| D763E | Uncertain significance | 0.888 | pathogenic | 해석 → | |
| D786E | Uncertain significance | 0.972 | pathogenic | 해석 → | |
| E353D | Uncertain significance | 0.705 | pathogenic | 해석 → | |
| E411A | Uncertain significance | 0.115 | benign | 해석 → | |
| E461K | Uncertain significance | 0.619 | pathogenic | 해석 → | |
| E461Q | Uncertain significance | 0.391 | ambiguous | 해석 → | |
| E666K | Uncertain significance | 0.466 | ambiguous | 해석 → | |
| E743K | Uncertain significance | 0.966 | pathogenic | 해석 → | |
| F534L | Uncertain significance | 0.725 | pathogenic | 해석 → | |
| F697C | Uncertain significance | 0.997 | pathogenic | 해석 → | |
| F729L | Uncertain significance | 0.988 | pathogenic | 해석 → | |
| G105R | Uncertain significance | 0.860 | pathogenic | 해석 → | |
| G115R | Uncertain significance | 0.449 | ambiguous | 해석 → | |
| G131S | Uncertain significance | 0.078 | benign | 해석 → | |
| G367R | Uncertain significance | 0.266 | benign | 해석 → | |
| G482S | Benign | 0.056 | benign | ✓ | 해석 → |
| G527A | Uncertain significance | 0.132 | benign | 해석 → | |
| G592S | Uncertain significance | 0.079 | benign | 해석 → | |
| H607R | Uncertain significance | 0.080 | benign | 해석 → | |
| H610P | Uncertain significance | 0.056 | benign | 해석 → | |
| H610Q | Uncertain significance | 0.100 | benign | 해석 → | |
| I182T | Uncertain significance | 0.081 | benign | 해석 → | |
| I280V | Uncertain significance | 0.084 | benign | 해석 → | |
| I396T | Uncertain significance | 0.167 | benign | 해석 → | |
| I501V | Uncertain significance | 0.121 | benign | 해석 → | |
| I64V | Uncertain significance | 0.087 | benign | 해석 → | |
| I703T | Uncertain significance | 0.970 | pathogenic | 해석 → | |
| K254E | Uncertain significance | 0.373 | ambiguous | 해석 → | |
| K317R | Uncertain significance | 0.087 | benign | 해석 → | |
| K480E | Uncertain significance | 0.121 | benign | 해석 → | |
| K480Q | Uncertain significance | 0.135 | benign | 해석 → | |
| K480T | Uncertain significance | 0.156 | benign | 해석 → | |
| K496Q | Uncertain significance | 0.181 | benign | 해석 → | |
| L260V | Uncertain significance | 0.359 | ambiguous | 해석 → | |
| L38F | Uncertain significance | 0.830 | pathogenic | 해석 → | |
| L410I | Benign | 0.066 | benign | ✓ | 해석 → |
| L438S | Benign | 0.063 | benign | ✓ | 해석 → |
| L557S | Uncertain significance | 0.142 | benign | 해석 → | |
| M128T | Uncertain significance | 0.095 | benign | 해석 → | |
| M565I | Uncertain significance | 0.139 | benign | 해석 → | |
| M5K | Uncertain significance | 0.122 | benign | 해석 → | |
| N168S | Uncertain significance | 0.096 | benign | 해석 → | |
| N228K | Uncertain significance | 0.152 | benign | 해석 → | |
| N535D | Likely benign | 0.046 | benign | ✓ | 해석 → |
| P274R | Uncertain significance | 0.570 | pathogenic | 해석 → | |
| P309S | Uncertain significance | 0.337 | benign | 해석 → | |
| P349Q | Uncertain significance | 0.217 | benign | 해석 → | |
| P524L | Uncertain significance | 0.096 | benign | 해석 → | |
| P627S | Uncertain significance | 0.244 | benign | 해석 → | |
| Q136K | Uncertain significance | 0.090 | benign | 해석 → | |
| Q198E | Uncertain significance | 0.145 | benign | 해석 → | |
| Q443H | Uncertain significance | 0.114 | benign | 해석 → | |
| Q560E | Uncertain significance | 0.088 | benign | 해석 → | |
| Q664R | Uncertain significance | 0.401 | ambiguous | 해석 → | |
| Q8P | Uncertain significance | 0.154 | benign | 해석 → | |
| R375P | Uncertain significance | 0.740 | pathogenic | 해석 → | |
| R379W | Uncertain significance | 0.354 | ambiguous | 해석 → | |
| R459Q | Uncertain significance | 0.736 | pathogenic | 해석 → | |
| R566C | Benign | 0.114 | benign | ✓ | 해석 → |
| R566H | Uncertain significance | 0.096 | benign | 해석 → | |
| R570G | Uncertain significance | 0.138 | benign | 해석 → | |
| R574Q | Uncertain significance | 0.084 | benign | 해석 → | |
| R576K | Uncertain significance | 0.219 | benign | 해석 → | |
| R611H | Benign/Likely benign | 0.088 | benign | ✓ | 해석 → |
| R611S | Uncertain significance | 0.209 | benign | 해석 → | |
| R614Q | Uncertain significance | 0.097 | benign | 해석 → | |
| R623P | Uncertain significance | 0.227 | benign | 해석 → | |
| R630C | Uncertain significance | 0.098 | benign | 해석 → | |
| R631W | Uncertain significance | 0.473 | ambiguous | 해석 → | |
| R651C | Uncertain significance | 0.205 | benign | 해석 → | |
| R651H | Uncertain significance | 0.155 | benign | 해석 → | |
| R696H | Uncertain significance | 0.849 | pathogenic | 해석 → | |
| R711W | Uncertain significance | 0.448 | ambiguous | 해석 → | |
| R723H | Uncertain significance | 0.856 | pathogenic | 해석 → | |
| R797C | Uncertain significance | 0.677 | pathogenic | 해석 → | |
| S318F | Uncertain significance | 0.134 | benign | 해석 → | |
| S336C | Uncertain significance | 0.078 | benign | 해석 → | |
| S336T | Uncertain significance | 0.072 | benign | 해석 → | |
| S441G | Uncertain significance | 0.058 | benign | 해석 → | |
| S441I | Uncertain significance | 0.105 | benign | 해석 → | |
| S487G | Uncertain significance | 0.071 | benign | 해석 → | |
| S490T | Uncertain significance | 0.089 | benign | 해석 → | |
| S495P | Uncertain significance | 0.262 | benign | 해석 → | |
| S542F | Uncertain significance | 0.238 | benign | 해석 → | |
| S599T | Uncertain significance | 0.116 | benign | 해석 → | |
| S768T | Uncertain significance | 0.097 | benign | 해석 → | |
| T178A | Uncertain significance | 0.071 | benign | 해석 → | |
| T257I | Uncertain significance | 0.198 | benign | 해석 → | |
| T279I | Uncertain significance | 0.274 | benign | 해석 → | |
| T394I | Uncertain significance | 0.166 | benign | 해석 → | |
| T449A | Uncertain significance | 0.070 | benign | 해석 → | |
| T481P | Uncertain significance | 0.096 | benign | 해석 → | |
| T612M | Benign | 0.096 | benign | ✓ | 해석 → |
| T612P | Uncertain significance | 0.067 | benign | 해석 → | |
| T725A | Uncertain significance | 0.678 | pathogenic | 해석 → | |
| V323L | Uncertain significance | 0.123 | benign | 해석 → | |
| V363F | Uncertain significance | 0.101 | benign | 해석 → | |
| V708I | Uncertain significance | 0.121 | benign | 해석 → | |
| W3R | Uncertain significance | 0.987 | pathogenic | 해석 → | |
| W57R | Uncertain significance | 0.994 | pathogenic | 해석 → | |
| Y158C | Uncertain significance | 0.102 | benign | 해석 → | |
| Y603H | Uncertain significance | 0.096 | benign | 해석 → | |
| Y634C | Uncertain significance | 0.578 | pathogenic | 해석 → | |
| Y680C | Uncertain significance | 0.383 | ambiguous | 해석 → | |
| G293C | - | 0.834 | pathogenic | 해석 → | |
| G752R | - | 0.779 | pathogenic | 해석 → | |
| I80V | - | 0.182 | benign | 해석 → | |
| R548I | - | 0.360 | ambiguous | 해석 → | |
| R548K | - | 0.167 | benign | 해석 → | |
| R594I | - | 0.375 | ambiguous | 해석 → | |
| R657* | - | — | 미적재 | 해석 → |
AM 임계: 병원성 ≥ 0.564, 양성 < 0.34 (AlphaMissense 권장 컷오프, Cheng et al. Science 2023)
📚 데이터: NCBI ClinVar variant_summary (GRCh38, 최근 다운로드) + 우리 유전자 서브셋만 추출.