ClinVar 임상 비교
AlphaMissense AI 예측 vs ClinVar 실제 임상 분류 — 일치/불일치 분석
ClinVar 변이 (서브셋)
319,822
우리 보유 유전자만
커버 유전자
308
병원성/가능 변이
56,770
AM과 교차 가능
154,518
단백질 변이 추출
TGFB1: AM vs ClinVar 일치도
277 변이✓ 둘 다 병원성
7
✓ 둘 다 양성
6
⚠ CV=병원성 / AM=양성
1
⚠ CV=양성 / AM=병원성
0
— AM 미적재
263
AM ↔ ClinVar 비교 가능 변이 14건 중 13건 일치 / 1건 불일치 — 일치도 92.9%
변이별 비교
Max 500| 변이 | ClinVar 분류 | AM 점수 | AM 분류 | 일치 | |
|---|---|---|---|---|---|
| C223G | Uncertain significance | 0.839 | pathogenic | 해석 → | |
| C223R | Pathogenic | 0.944 | pathogenic | ✓ | 해석 → |
| C225R | Pathogenic | 0.970 | pathogenic | ✓ | 해석 → |
| C387R | Likely pathogenic | 0.999 | pathogenic | ✓ | 해석 → |
| R110C | Likely pathogenic | 0.850 | pathogenic | ✓ | 해석 → |
| R156C | Conflicting classifications of pathogeni | 0.954 | pathogenic | 해석 → | |
| R218C | Pathogenic | 0.545 | ambiguous | 해석 → | |
| R218H | Pathogenic/Likely pathogenic | 0.280 | benign | ⚠ | 해석 → |
| R45C | Likely pathogenic | 0.998 | pathogenic | ✓ | 해석 → |
| Y171C | Likely pathogenic | 0.937 | pathogenic | ✓ | 해석 → |
| Y299* | Likely pathogenic | — | 미적재 | 해석 → | |
| Y81H | Pathogenic | 0.982 | pathogenic | ✓ | 해석 → |
| A101V | Uncertain significance | 0.127 | benign | 해석 → | |
| A143V | Uncertain significance | 0.130 | benign | 해석 → | |
| A153V | Uncertain significance | 0.772 | pathogenic | 해석 → | |
| A221S | Uncertain significance | 0.109 | benign | 해석 → | |
| A221T | Uncertain significance | 0.102 | benign | 해석 → | |
| A268V | Uncertain significance | 0.145 | benign | 해석 → | |
| A279T | Uncertain significance | 0.183 | benign | 해석 → | |
| A341F | Uncertain significance | 0.900 | pathogenic | 해석 → | |
| A341S | Uncertain significance | 0.124 | benign | 해석 → | |
| A341T | Uncertain significance | 0.574 | pathogenic | 해석 → | |
| A360V | Uncertain significance | 0.087 | benign | 해석 → | |
| A60G | Uncertain significance | 0.132 | benign | 해석 → | |
| C223S | Uncertain significance | 0.945 | pathogenic | 해석 → | |
| C293F | Uncertain significance | 0.999 | pathogenic | 해석 → | |
| C293Y | Uncertain significance | 1.000 | pathogenic | 해석 → | |
| C387G | Uncertain significance | 0.995 | pathogenic | 해석 → | |
| C387S | Uncertain significance | 1.000 | pathogenic | 해석 → | |
| D102Y | Uncertain significance | 0.603 | pathogenic | 해석 → | |
| D122N | Uncertain significance | 0.064 | benign | 해석 → | |
| D191N | Uncertain significance | 0.074 | benign | 해석 → | |
| D199A | Uncertain significance | 0.487 | ambiguous | 해석 → | |
| D226N | Uncertain significance | 0.138 | benign | 해석 → | |
| D229G | Uncertain significance | 0.117 | benign | 해석 → | |
| D229N | Uncertain significance | 0.089 | benign | 해석 → | |
| D229V | Uncertain significance | 0.182 | benign | 해석 → | |
| D281N | Uncertain significance | 0.355 | ambiguous | 해석 → | |
| D301H | Uncertain significance | 0.966 | pathogenic | 해석 → | |
| D86E | Uncertain significance | 0.514 | ambiguous | 해석 → | |
| D86H | Uncertain significance | 0.890 | pathogenic | 해석 → | |
| D86Y | Uncertain significance | 0.786 | pathogenic | 해석 → | |
| E100D | Uncertain significance | 0.116 | benign | 해석 → | |
| E107K | Uncertain significance | 0.894 | pathogenic | 해석 → | |
| E115K | Uncertain significance | 0.124 | benign | 해석 → | |
| E146Q | Uncertain significance | 0.082 | benign | 해석 → | |
| E169Q | Uncertain significance | 0.817 | pathogenic | 해석 → | |
| E313D | Uncertain significance | 0.941 | pathogenic | 해석 → | |
| E313K | Uncertain significance | 0.728 | pathogenic | 해석 → | |
| E377K | Uncertain significance | 0.980 | pathogenic | 해석 → | |
| E39A | Uncertain significance | 0.450 | ambiguous | 해석 → | |
| E91G | Uncertain significance | 0.100 | benign | 해석 → | |
| E91K | Uncertain significance | 0.121 | benign | 해석 → | |
| E96K | Uncertain significance | 0.087 | benign | 해석 → | |
| E98K | Uncertain significance | 0.134 | benign | 해석 → | |
| E98Q | Uncertain significance | 0.097 | benign | 해석 → | |
| F124V | Uncertain significance | 0.111 | benign | 해석 → | |
| F239I | Uncertain significance | 0.080 | benign | 해석 → | |
| G202R | Uncertain significance | 0.184 | benign | 해석 → | |
| G238R | Uncertain significance | 0.946 | pathogenic | 해석 → | |
| G242S | Uncertain significance | 0.062 | benign | 해석 → | |
| G245S | Uncertain significance | 0.522 | ambiguous | 해석 → | |
| G252S | Uncertain significance | 0.081 | benign | 해석 → | |
| G29A | Uncertain significance | 0.078 | benign | 해석 → | |
| G29E | Conflicting classifications of pathogeni | 0.448 | ambiguous | 해석 → | |
| G29R | Uncertain significance | 0.682 | pathogenic | 해석 → | |
| G29R | Uncertain significance | 0.682 | pathogenic | 해석 → | |
| G307S | Uncertain significance | 0.452 | ambiguous | 해석 → | |
| G324R | Uncertain significance | 1.000 | pathogenic | 해석 → | |
| G349D | Uncertain significance | 0.624 | pathogenic | 해석 → | |
| G349S | Uncertain significance | 0.178 | benign | 해석 → | |
| G51C | Uncertain significance | 0.990 | pathogenic | 해석 → | |
| G51R | Uncertain significance | 0.993 | pathogenic | 해석 → | |
| G5R | Uncertain significance | 0.375 | ambiguous | 해석 → | |
| G5R | Uncertain significance | 0.375 | ambiguous | 해석 → | |
| G71D | Uncertain significance | 0.460 | ambiguous | 해석 → | |
| G90W | Uncertain significance | 0.419 | ambiguous | 해석 → | |
| H129R | Uncertain significance | 0.107 | benign | 해석 → | |
| H167D | Uncertain significance | 0.673 | pathogenic | 해석 → | |
| H222D | not provided | 0.830 | pathogenic | 해석 → | |
| H222L | Uncertain significance | 0.591 | pathogenic | 해석 → | |
| H222R | Uncertain significance | 0.526 | ambiguous | 해석 → | |
| H251R | Uncertain significance | 0.085 | benign | 해석 → | |
| H270Y | Uncertain significance | 0.106 | benign | 해석 → | |
| H312Y | Uncertain significance | 0.728 | pathogenic | 해석 → | |
| H318R | Uncertain significance | 0.154 | benign | 해석 → | |
| I120M | Uncertain significance | 0.082 | benign | 해석 → | |
| I131T | Uncertain significance | 0.192 | benign | 해석 → | |
| I250S | Uncertain significance | 0.641 | pathogenic | 해석 → | |
| I300L | Uncertain significance | 0.893 | pathogenic | 해석 → | |
| I300T | Uncertain significance | 0.997 | pathogenic | 해석 → | |
| I311V | Uncertain significance | 0.703 | pathogenic | 해석 → | |
| I366M | Uncertain significance | 0.829 | pathogenic | 해석 → | |
| I366T | Uncertain significance | 0.997 | pathogenic | 해석 → | |
| I366V | Uncertain significance | 0.396 | ambiguous | 해석 → | |
| I383F | Uncertain significance | 0.935 | pathogenic | 해석 → | |
| I49S | Uncertain significance | 0.999 | pathogenic | 해석 → | |
| I53T | Uncertain significance | 1.000 | pathogenic | 해석 → | |
| K123E | Uncertain significance | 0.092 | benign | 해석 → | |
| K123R | Uncertain significance | 0.071 | benign | 해석 → | |
| K125R | Uncertain significance | 0.068 | benign | 해석 → | |
| K161N | Uncertain significance | 0.244 | benign | 해석 → | |
| K161Q | Uncertain significance | 0.101 | benign | 해석 → | |
| K161R | Uncertain significance | 0.085 | benign | 해석 → | |
| K161T | Uncertain significance | 0.138 | benign | 해석 → | |
| K173E | Uncertain significance | 0.343 | ambiguous | 해석 → | |
| K291T | Uncertain significance | 0.402 | ambiguous | 해석 → | |
| K309R | Uncertain significance | 0.228 | benign | 해석 → | |
| K315E | Uncertain significance | 0.476 | ambiguous | 해석 → | |
| K315N | Uncertain significance | 0.832 | pathogenic | 해석 → | |
| K315R | Uncertain significance | 0.096 | benign | 해석 → | |
| K338T | Uncertain significance | 0.494 | ambiguous | 해석 → | |
| K373R | Uncertain significance | 0.112 | benign | 해석 → | |
| K375R | Uncertain significance | 0.108 | benign | 해석 → | |
| K388N | Uncertain significance | 0.968 | pathogenic | 해석 → | |
| K388R | Uncertain significance | 0.120 | benign | 해석 → | |
| L11Q | Uncertain significance | 0.129 | benign | 해석 → | |
| L13P | Uncertain significance | 0.078 | benign | 해석 → | |
| L13Q | Uncertain significance | 0.139 | benign | 해석 → | |
| L155M | Uncertain significance | 0.340 | benign | 해석 → | |
| L160F | Uncertain significance | 0.091 | benign | 해석 → | |
| L162S | Uncertain significance | 0.132 | benign | 해석 → | |
| L19P | Uncertain significance | 0.089 | benign | 해석 → | |
| L19R | Uncertain significance | 0.214 | benign | 해석 → | |
| L259I | Uncertain significance | 0.301 | benign | 해석 → | |
| L260P | Uncertain significance | 0.991 | pathogenic | 해석 → | |
| L298P | Uncertain significance | 0.999 | pathogenic | 해석 → | |
| L57M | Uncertain significance | 0.930 | pathogenic | 해석 → | |
| M113T | Uncertain significance | 0.187 | benign | 해석 → | |
| M133I | Uncertain significance | 0.525 | ambiguous | 해석 → | |
| M133L | Uncertain significance | 0.153 | benign | 해석 → | |
| M133V | Uncertain significance | 0.152 | benign | 해석 → | |
| M261I | Uncertain significance | 0.931 | pathogenic | 해석 → | |
| M261L | Uncertain significance | 0.307 | benign | 해석 → | |
| M261T | Uncertain significance | 0.523 | ambiguous | 해석 → | |
| M382T | Uncertain significance | 0.998 | pathogenic | 해석 → | |
| M38T | Uncertain significance | 0.628 | pathogenic | 해석 → | |
| M38V | Uncertain significance | 0.233 | benign | 해석 → | |
| N136S | Uncertain significance | 0.106 | benign | 해석 → | |
| N136Y | Uncertain significance | 0.393 | ambiguous | 해석 → | |
| N176S | Uncertain significance | 0.082 | benign | 해석 → | |
| N177D | Uncertain significance | 0.061 | benign | 해석 → | |
| N184K | Uncertain significance | 0.647 | pathogenic | 해석 → | |
| N283S | Uncertain significance | 0.060 | benign | 해석 → | |
| N344T | Uncertain significance | 0.392 | ambiguous | 해석 → | |
| N344Y | Uncertain significance | 0.609 | pathogenic | 해석 → | |
| N381H | Uncertain significance | 0.550 | ambiguous | 해석 → | |
| N381S | Uncertain significance | 0.188 | benign | 해석 → | |
| P10L | Benign | 0.180 | benign | ✓ | 해석 → |
| P10L | Likely benign | 0.180 | benign | ✓ | 해석 → |
| P10L | Likely benign | 0.180 | benign | ✓ | 해석 → |
| P10R | Uncertain significance | 0.138 | benign | 해석 → | |
| P145S | Uncertain significance | 0.111 | benign | 해석 → | |
| P147S | Uncertain significance | 0.126 | benign | 해석 → | |
| P14Q | Uncertain significance | 0.256 | benign | 해석 → | |
| P189S | Uncertain significance | 0.121 | benign | 해석 → | |
| P264L | Uncertain significance | 0.890 | pathogenic | 해석 → | |
| P26S | Uncertain significance | 0.090 | benign | 해석 → | |
| P2H | Uncertain significance | 0.137 | benign | 해석 → | |
| P2L | Uncertain significance | 0.140 | benign | 해석 → | |
| P325A | Uncertain significance | 0.222 | benign | 해석 → | |
| P354S | Uncertain significance | 0.977 | pathogenic | 해석 → | |
| P354T | Uncertain significance | 0.984 | pathogenic | 해석 → | |
| P358L | Uncertain significance | 0.991 | pathogenic | 해석 → | |
| P363R | Uncertain significance | 0.942 | pathogenic | 해석 → | |
| P62T | Uncertain significance | 0.561 | ambiguous | 해석 → | |
| P63S | Uncertain significance | 0.966 | pathogenic | 해석 → | |
| P69L | Uncertain significance | 0.143 | benign | 해석 → | |
| P70L | Uncertain significance | 0.132 | benign | 해석 → | |
| P72L | Uncertain significance | 0.161 | benign | 해석 → | |
| P95Q | Uncertain significance | 0.082 | benign | 해석 → | |
| P99S | Uncertain significance | 0.098 | benign | 해석 → | |
| P99T | Uncertain significance | 0.074 | benign | 해석 → | |
| Q126R | Uncertain significance | 0.069 | benign | 해석 → | |
| Q335R | Uncertain significance | 0.517 | ambiguous | 해석 → | |
| Q65* | Uncertain significance | — | 미적재 | 해석 → | |
| R141Q | Uncertain significance | 0.080 | benign | 해석 → | |
| R152Q | Conflicting classifications of pathogeni | 0.121 | benign | 해석 → | |
| R152W | Uncertain significance | 0.233 | benign | 해석 → | |
| R156H | Uncertain significance | 0.608 | pathogenic | 해석 → | |
| R180* | Uncertain significance | — | 미적재 | 해석 → | |
| R185Q | Uncertain significance | 0.066 | benign | 해석 → | |
| R185W | Uncertain significance | 0.184 | benign | 해석 → | |
| R205G | Uncertain significance | 0.203 | benign | 해석 → | |
| R205W | Uncertain significance | 0.161 | benign | 해석 → | |
| R210C | Conflicting classifications of pathogeni | 0.159 | benign | 해석 → | |
| R210H | Uncertain significance | 0.057 | benign | 해석 → | |
| R228G | Uncertain significance | 0.097 | benign | 해석 → | |
| R228K | Uncertain significance | 0.054 | benign | 해석 → | |
| R228S | Uncertain significance | 0.136 | benign | 해석 → | |
| R243H | Uncertain significance | 0.102 | benign | 해석 → | |
| R244* | Uncertain significance | — | 미적재 | 해석 → | |
| R255L | Uncertain significance | 0.282 | benign | 해석 → | |
| R255Q | Uncertain significance | 0.104 | benign | 해석 → | |
| R255W | Uncertain significance | 0.294 | benign | 해석 → | |
| R25G | Uncertain significance | 0.072 | benign | 해석 → | |
| R25P | Benign | 0.154 | benign | ✓ | 해석 → |
| R25Q | Uncertain significance | 0.105 | benign | 해석 → | |
| R275Q | Uncertain significance | 0.473 | ambiguous | 해석 → | |
| R277C | Uncertain significance | 0.807 | pathogenic | 해석 → |
AM 임계: 병원성 ≥ 0.564, 양성 < 0.34 (AlphaMissense 권장 컷오프, Cheng et al. Science 2023)
📚 데이터: NCBI ClinVar variant_summary (GRCh38, 최근 다운로드) + 우리 유전자 서브셋만 추출.