ClinVar 임상 비교
AlphaMissense AI 예측 vs ClinVar 실제 임상 분류 — 일치/불일치 분석
ClinVar 변이 (서브셋)
319,822
우리 보유 유전자만
커버 유전자
308
병원성/가능 변이
56,770
AM과 교차 가능
154,518
단백질 변이 추출
TNC: AM vs ClinVar 일치도
442 변이✓ 둘 다 병원성
0
✓ 둘 다 양성
64
⚠ CV=병원성 / AM=양성
4
⚠ CV=양성 / AM=병원성
2
— AM 미적재
372
AM ↔ ClinVar 비교 가능 변이 70건 중 64건 일치 / 6건 불일치 — 일치도 91.4%
변이별 비교
Max 500| 변이 | ClinVar 분류 | AM 점수 | AM 분류 | 일치 | |
|---|---|---|---|---|---|
| A981T | Conflicting classifications of pathogeni | 0.214 | benign | 해석 → | |
| P1064L | Likely pathogenic | 0.183 | benign | ⚠ | 해석 → |
| Q1391R | Likely pathogenic | 0.073 | benign | ⚠ | 해석 → |
| R108H | Likely pathogenic | 0.188 | benign | ⚠ | 해석 → |
| T1796S | Pathogenic | 0.111 | benign | ⚠ | 해석 → |
| V1773M | Conflicting classifications of pathogeni | 0.082 | benign | 해석 → | |
| A1055T | Uncertain significance | 0.265 | benign | 해석 → | |
| A1074V | Uncertain significance | 0.081 | benign | 해석 → | |
| A1096T | Benign | 0.081 | benign | ✓ | 해석 → |
| A1100V | Uncertain significance | 0.127 | benign | 해석 → | |
| A115T | Uncertain significance | 0.104 | benign | 해석 → | |
| A1187V | Likely benign | 0.136 | benign | ✓ | 해석 → |
| A1207T | Uncertain significance | 0.080 | benign | 해석 → | |
| A1271V | Uncertain significance | 0.130 | benign | 해석 → | |
| A1373S | Uncertain significance | 0.092 | benign | 해석 → | |
| A1401S | Uncertain significance | 0.086 | benign | 해석 → | |
| A1410S | Uncertain significance | 0.076 | benign | 해석 → | |
| A1704S | Uncertain significance | 0.191 | benign | 해석 → | |
| A1781T | Benign | 0.221 | benign | ✓ | 해석 → |
| A19T | Uncertain significance | 0.065 | benign | 해석 → | |
| A2083V | Uncertain significance | 0.283 | benign | 해석 → | |
| A2201S | Uncertain significance | 0.115 | benign | 해석 → | |
| A39T | Likely benign | 0.070 | benign | ✓ | 해석 → |
| A3S | Uncertain significance | 0.086 | benign | 해석 → | |
| A528E | Uncertain significance | 0.163 | benign | 해석 → | |
| A706T | Uncertain significance | 0.249 | benign | 해석 → | |
| A706V | Uncertain significance | 0.410 | ambiguous | 해석 → | |
| A78T | Uncertain significance | 0.071 | benign | 해석 → | |
| A977V | Uncertain significance | 0.242 | benign | 해석 → | |
| C140Y | Uncertain significance | 0.944 | pathogenic | 해석 → | |
| C146R | Uncertain significance | 0.928 | pathogenic | 해석 → | |
| C496S | Uncertain significance | 0.992 | pathogenic | 해석 → | |
| C527S | Uncertain significance | 0.979 | pathogenic | 해석 → | |
| C563G | Uncertain significance | 0.878 | pathogenic | 해석 → | |
| C580R | Uncertain significance | 0.958 | pathogenic | 해석 → | |
| D1098V | Uncertain significance | 0.264 | benign | 해석 → | |
| D1258G | Uncertain significance | 0.077 | benign | 해석 → | |
| D1462N | Uncertain significance | 0.079 | benign | 해석 → | |
| D1539E | Uncertain significance | 0.343 | ambiguous | 해석 → | |
| D156G | Uncertain significance | 0.224 | benign | 해석 → | |
| D1634H | Uncertain significance | 0.452 | ambiguous | 해석 → | |
| D1758N | Uncertain significance | 0.127 | benign | 해석 → | |
| D1827V | Uncertain significance | 0.641 | pathogenic | 해석 → | |
| D1827Y | Uncertain significance | 0.549 | ambiguous | 해석 → | |
| D2059E | Uncertain significance | 0.263 | benign | 해석 → | |
| D2078N | Uncertain significance | 0.490 | ambiguous | 해석 → | |
| D2088N | Uncertain significance | 0.218 | benign | 해석 → | |
| D209N | Conflicting classifications of pathogeni | 0.085 | benign | 해석 → | |
| D2160V | Uncertain significance | 0.886 | pathogenic | 해석 → | |
| D277N | Uncertain significance | 0.083 | benign | 해석 → | |
| D321N | Uncertain significance | 0.259 | benign | 해석 → | |
| D433N | Benign | 0.185 | benign | ✓ | 해석 → |
| D504H | Uncertain significance | 0.462 | ambiguous | 해석 → | |
| D520N | Uncertain significance | 0.087 | benign | 해석 → | |
| D736G | Benign | 0.327 | benign | ✓ | 해석 → |
| D816G | Uncertain significance | 0.542 | ambiguous | 해석 → | |
| D831N | Uncertain significance | 0.135 | benign | 해석 → | |
| D894N | Uncertain significance | 0.387 | ambiguous | 해석 → | |
| D971N | Uncertain significance | 0.110 | benign | 해석 → | |
| D990N | Uncertain significance | 0.121 | benign | 해석 → | |
| E1048K | Uncertain significance | 0.135 | benign | 해석 → | |
| E1115K | Uncertain significance | 0.128 | benign | 해석 → | |
| E1175K | Likely benign | 0.070 | benign | ✓ | 해석 → |
| E1297K | Uncertain significance | 0.068 | benign | 해석 → | |
| E1329D | Uncertain significance | 0.186 | benign | 해석 → | |
| E1341G | Uncertain significance | 0.162 | benign | 해석 → | |
| E1466K | Uncertain significance | 0.099 | benign | 해석 → | |
| E1466Q | Uncertain significance | 0.122 | benign | 해석 → | |
| E1533Q | Uncertain significance | 0.163 | benign | 해석 → | |
| E1574Q | Uncertain significance | 0.192 | benign | 해석 → | |
| E1585D | Uncertain significance | 0.245 | benign | 해석 → | |
| E170K | Uncertain significance | 0.173 | benign | 해석 → | |
| E1723K | Uncertain significance | 0.287 | benign | 해석 → | |
| E1836K | Conflicting classifications of pathogeni | 0.085 | benign | 해석 → | |
| E1862K | Uncertain significance | 0.105 | benign | 해석 → | |
| E189K | Uncertain significance | 0.156 | benign | 해석 → | |
| E2008Q | Benign | 0.059 | benign | ✓ | 해석 → |
| E2034K | Uncertain significance | 0.190 | benign | 해석 → | |
| E2071K | Uncertain significance | 0.786 | pathogenic | 해석 → | |
| E2176G | Uncertain significance | 0.932 | pathogenic | 해석 → | |
| E21K | Benign/Likely benign | 0.094 | benign | ✓ | 해석 → |
| E240K | Uncertain significance | 0.104 | benign | 해석 → | |
| E333K | Uncertain significance | 0.175 | benign | 해석 → | |
| E333Q | Uncertain significance | 0.189 | benign | 해석 → | |
| E365A | Uncertain significance | 0.136 | benign | 해석 → | |
| E451K | Uncertain significance | 0.076 | benign | 해석 → | |
| E529Q | Uncertain significance | 0.141 | benign | 해석 → | |
| E582K | Uncertain significance | 0.090 | benign | 해석 → | |
| E661K | Uncertain significance | 0.090 | benign | 해석 → | |
| E731A | Uncertain significance | 0.227 | benign | 해석 → | |
| E731K | Uncertain significance | 0.349 | ambiguous | 해석 → | |
| E743K | Uncertain significance | 0.695 | pathogenic | 해석 → | |
| E780D | Conflicting classifications of pathogeni | 0.431 | ambiguous | 해석 → | |
| E810Q | Uncertain significance | 0.182 | benign | 해석 → | |
| E834G | Uncertain significance | 0.258 | benign | 해석 → | |
| E855K | Uncertain significance | 0.174 | benign | 해석 → | |
| E85K | Uncertain significance | 0.070 | benign | 해석 → | |
| E870K | Uncertain significance | 0.213 | benign | 해석 → | |
| E912Q | Uncertain significance | 0.261 | benign | 해석 → | |
| E998D | Uncertain significance | 0.139 | benign | 해석 → | |
| F1012S | Uncertain significance | 0.819 | pathogenic | 해석 → | |
| F1242I | Uncertain significance | 0.129 | benign | 해석 → | |
| F1556C | Uncertain significance | 0.974 | pathogenic | 해석 → | |
| F320S | Uncertain significance | 0.369 | ambiguous | 해석 → | |
| G1028R | Uncertain significance | 0.166 | benign | 해석 → | |
| G1046V | Uncertain significance | 0.510 | ambiguous | 해석 → | |
| G1086V | Uncertain significance | 0.166 | benign | 해석 → | |
| G1163A | Uncertain significance | 0.136 | benign | 해석 → | |
| G1215R | Uncertain significance | 0.477 | ambiguous | 해석 → | |
| G1281A | Uncertain significance | 0.113 | benign | 해석 → | |
| G1359D | Likely benign | 0.129 | benign | ✓ | 해석 → |
| G145V | Benign | 0.175 | benign | ✓ | 해석 → |
| G1497A | Uncertain significance | 0.155 | benign | 해석 → | |
| G1567E | Uncertain significance | 0.911 | pathogenic | 해석 → | |
| G163C | Uncertain significance | 0.757 | pathogenic | 해석 → | |
| G163S | Uncertain significance | 0.115 | benign | 해석 → | |
| G171R | Likely benign | 0.244 | benign | ✓ | 해석 → |
| G171V | Uncertain significance | 0.135 | benign | 해석 → | |
| G1759R | Uncertain significance | 0.496 | ambiguous | 해석 → | |
| G1784D | Uncertain significance | 0.290 | benign | 해석 → | |
| G1847R | Uncertain significance | 0.682 | pathogenic | 해석 → | |
| G1872A | Likely benign | 0.280 | benign | ✓ | 해석 → |
| G1872E | Uncertain significance | 0.240 | benign | 해석 → | |
| G1996A | Uncertain significance | 0.346 | ambiguous | 해석 → | |
| G203V | Conflicting classifications of pathogeni | 0.660 | pathogenic | 해석 → | |
| G210S | Benign/Likely benign | 0.102 | benign | ✓ | 해석 → |
| G2111D | Uncertain significance | 0.962 | pathogenic | 해석 → | |
| G213S | Benign | 0.188 | benign | ✓ | 해석 → |
| G229D | Uncertain significance | 0.988 | pathogenic | 해석 → | |
| G261S | Benign | 0.654 | pathogenic | ⚠ | 해석 → |
| G276D | Uncertain significance | 0.439 | ambiguous | 해석 → | |
| G292R | Uncertain significance | 0.979 | pathogenic | 해석 → | |
| G304S | Uncertain significance | 0.186 | benign | 해석 → | |
| G335A | Uncertain significance | 0.387 | ambiguous | 해석 → | |
| G400A | Uncertain significance | 0.261 | benign | 해석 → | |
| G404W | Uncertain significance | 0.299 | benign | 해석 → | |
| G428V | Uncertain significance | 0.329 | benign | 해석 → | |
| G478S | Uncertain significance | 0.742 | pathogenic | 해석 → | |
| G490S | Uncertain significance | 0.081 | benign | 해석 → | |
| G493R | Conflicting classifications of pathogeni | 0.595 | pathogenic | 해석 → | |
| G509C | Uncertain significance | 0.955 | pathogenic | 해석 → | |
| G509D | Uncertain significance | 0.940 | pathogenic | 해석 → | |
| G540R | Uncertain significance | 0.919 | pathogenic | 해석 → | |
| G545V | Conflicting classifications of pathogeni | 0.904 | pathogenic | 해석 → | |
| G571R | Uncertain significance | 0.941 | pathogenic | 해석 → | |
| G576S | Uncertain significance | 0.201 | benign | 해석 → | |
| G583S | Uncertain significance | 0.199 | benign | 해석 → | |
| G617R | Uncertain significance | 0.313 | benign | 해석 → | |
| G617V | Uncertain significance | 0.649 | pathogenic | 해석 → | |
| G672R | Uncertain significance | 0.811 | pathogenic | 해석 → | |
| G792C | Conflicting classifications of pathogeni | 0.972 | pathogenic | 해석 → | |
| G838D | Uncertain significance | 0.562 | ambiguous | 해석 → | |
| G838S | Uncertain significance | 0.151 | benign | 해석 → | |
| G932A | Uncertain significance | 0.407 | ambiguous | 해석 → | |
| G933E | Uncertain significance | 0.598 | pathogenic | 해석 → | |
| G94E | Uncertain significance | 0.120 | benign | 해석 → | |
| H1230D | Uncertain significance | 0.118 | benign | 해석 → | |
| H1230R | Uncertain significance | 0.057 | benign | 해석 → | |
| H1494R | Conflicting classifications of pathogeni | 0.073 | benign | 해석 → | |
| H2079N | Uncertain significance | 0.063 | benign | 해석 → | |
| H537R | Uncertain significance | 0.120 | benign | 해석 → | |
| I1148V | Uncertain significance | 0.165 | benign | 해석 → | |
| I1197V | Likely benign | 0.215 | benign | ✓ | 해석 → |
| I1515V | Conflicting classifications of pathogeni | 0.087 | benign | 해석 → | |
| I1677L | Benign | 0.259 | benign | ✓ | 해석 → |
| I1747F | Uncertain significance | 0.107 | benign | 해석 → | |
| I1970V | Uncertain significance | 0.084 | benign | 해석 → | |
| I1974N | Uncertain significance | 0.278 | benign | 해석 → | |
| I1974T | Likely benign | 0.078 | benign | ✓ | 해석 → |
| I237L | Uncertain significance | 0.099 | benign | 해석 → | |
| I237V | Likely benign | 0.067 | benign | ✓ | 해석 → |
| I56V | Uncertain significance | 0.287 | benign | 해석 → | |
| I757L | Uncertain significance | 0.375 | ambiguous | 해석 → | |
| I781T | Uncertain significance | 0.960 | pathogenic | 해석 → | |
| I874V | Benign/Likely benign | 0.093 | benign | ✓ | 해석 → |
| K1437R | Uncertain significance | 0.081 | benign | 해석 → | |
| K1871E | Uncertain significance | 0.395 | ambiguous | 해석 → | |
| K1882T | Uncertain significance | 0.124 | benign | 해석 → | |
| K2063E | Uncertain significance | 0.359 | ambiguous | 해석 → | |
| K2096T | Uncertain significance | 0.408 | ambiguous | 해석 → | |
| K281R | Uncertain significance | 0.092 | benign | 해석 → | |
| K375M | Uncertain significance | 0.298 | benign | 해석 → | |
| K627R | Uncertain significance | 0.102 | benign | 해석 → | |
| K812E | Uncertain significance | 0.190 | benign | 해석 → | |
| K969R | Uncertain significance | 0.110 | benign | 해석 → | |
| K989N | Uncertain significance | 0.647 | pathogenic | 해석 → | |
| L1247I | Benign | 0.092 | benign | ✓ | 해석 → |
| L1252S | Uncertain significance | 0.100 | benign | 해석 → | |
| L1350V | Uncertain significance | 0.222 | benign | 해석 → | |
| L1456V | Uncertain significance | 0.095 | benign | 해석 → | |
| L1478S | Uncertain significance | 0.134 | benign | 해석 → | |
| L1508F | Uncertain significance | 0.306 | benign | 해석 → | |
| L1577F | Uncertain significance | 0.268 | benign | 해석 → | |
| L1626P | Uncertain significance | 0.992 | pathogenic | 해석 → | |
| L1690F | Uncertain significance | 0.762 | pathogenic | 해석 → | |
| L1769F | Uncertain significance | 0.550 | ambiguous | 해석 → | |
| L1769R | Uncertain significance | 0.911 | pathogenic | 해석 → | |
| L1905F | Uncertain significance | 0.492 | ambiguous | 해석 → | |
| L2027M | Uncertain significance | 0.434 | ambiguous | 해석 → | |
| L283P | Uncertain significance | 0.521 | ambiguous | 해석 → |
AM 임계: 병원성 ≥ 0.564, 양성 < 0.34 (AlphaMissense 권장 컷오프, Cheng et al. Science 2023)
📚 데이터: NCBI ClinVar variant_summary (GRCh38, 최근 다운로드) + 우리 유전자 서브셋만 추출.